RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PTPRJQ12913 1337 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 SMIM28A0A1B0GU29 152 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 AMHP03971 560 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 FGFR1P11362 822 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 PRKCSHP14314 528 aaPredicted RBP18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 KCNE1P15382 129 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 TNNI1P19237 187 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 FXR1P51114 621 aaKnown RBP eCLIP18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 PPP3CAQ08209 521 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 MAN2A1Q16706 1144 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 CLLU1OSQ5K130 101 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 LMBRD2Q68DH5 695 aaPredicted RBP18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 JADE1Q6IE81 842 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 REXO1L1PQ8IX06 675 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 EFCAB13Q8IY85 973 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 HERVK_113Q902F9 699 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 TOP1MTQ969P6 601 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 ERGIC2Q96RQ1 377 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 CXXC1Q9P0U4 656 aaPredicted RBP18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 LRFN2Q9ULH4 789 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 PPP2R2CQ9Y2T4 447 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 MICAL3Q7RTP6 2002 aa18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 TNRC18O15417 2968 aaPredicted RBP18.28■□□□□ 0.52
EXOSC3-203ENST00000465229 PTGESO14684 152 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 INPPL1O15357 1258 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 UPP2O95045 317 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 NFICP08651 508 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 KCNH2Q12809 1159 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 ZBTB6Q15916 424 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 VWA3BQ502W6 1294 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 FIGNQ5HY92 759 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 GLRA4Q5JXX5 417 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 GLB1LQ6UWU2 654 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 TMTC1Q8IUR5 882 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 WDR49Q8IV35 697 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 OR5B17Q8NGF7 314 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 KIF18AQ8NI77 898 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 HELQQ8TDG4 1101 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 CGRRF1Q99675 332 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 PLAGL2Q9UPG8 496 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 C2CD2Q9Y426 696 aa18.27■□□□□ 0.52
EXOSC3-203ENST00000465229 ZBBXA8MT70 800 aa18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 CAPN15O75808 1086 aa18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 GCLMP48507 274 aa18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 TMCO2Q7Z6W1 182 aaPredicted RBP18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 KIF12Q96FN5 646 aa18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 NDST4Q9H3R1 872 aa18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 ABHD10Q9NUJ1 306 aa18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 CAPN11Q9UMQ6 739 aa18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 INPP5FQ9Y2H2 1132 aa18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 DERAQ9Y315 318 aa18.27■□□□□ 0.51
EXOSC3-203ENST00000465229 CITO14578 2027 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 H0YGN5 161 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 AFPP02771 609 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 GTF2H1P32780 548 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 GATMP50440 423 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 SCNN1GP51170 649 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 TFAMQ00059 246 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 TMEM132DQ14C87 1099 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 DUOXA2Q1HG44 320 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 FKBP15Q5T1M5 1219 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 SV2AQ7L0J3 742 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 NT5DC4Q86YG4 428 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 CPLX3Q8WVH0 158 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 CASD1Q96PB1 797 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 PPP1R10Q96QC0 940 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 RPS6KC1Q96S38 1066 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 TSPAN18Q96SJ8 248 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 TMEM117Q9H0C3 514 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 MMRN2Q9H8L6 949 aa18.26■□□□□ 0.51
EXOSC3-203ENST00000465229 RIOK3O14730 519 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 HOXA2O43364 376 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 POMCP01189 267 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 C4BPAP04003 597 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 FMO5P49326 533 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 AP3M2P53677 418 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 ETF1P62495 437 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 CBWD6Q4V339 395 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 NOMO2Q5JPE7 1267 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 CBWD3Q5JTY5 395 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 CBWD5Q5RIA9 395 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 C15orf39Q6ZRI6 1047 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 TMEM130Q8N3G9 435 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 C18orf25Q96B23 403 aaPredicted RBP18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 DNAJC7Q99615 494 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 TTYH3Q9C0H2 523 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 MTMR12Q9C0I1 747 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 TRIP11Q15643 1979 aa18.25■□□□□ 0.51
EXOSC3-203ENST00000465229 A0A1W2PQJ5 194 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 PES1O00541 588 aaKnown RBP18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 DGKIO75912 1065 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 THP07101 528 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 KRT9P35527 623 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 NAB2Q15742 525 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 ZACNQ401N2 412 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 C9orf50Q5SZB4 431 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 RASIP1Q5U651 963 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 SCARA3Q6AZY7 606 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 FAM117BQ6P1L5 589 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms