RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 KRT5P13647 590 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 KRT15P19012 456 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 SSR1P43307 286 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 ERFP50548 548 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 PRELPP51888 382 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 YARSP54577 528 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 P3H1Q32P28 736 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 ATP13A4Q4VNC1 1196 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 MTDHQ86UE4 582 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 TRABD2AQ86V40 505 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 ANKRD35Q8N283 1001 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 SLCO2A1Q92959 643 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 TRABDQ9H4I3 376 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 USH1CQ9Y6N9 552 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 CD58P19256 250 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 CCDC15Q0P6D6 951 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 FAM182AQ5T1J6 154 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 STXBP4Q6ZWJ1 553 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 ZNF365Q70YC5 407 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 GSTA5Q7RTV2 222 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 TAS1R2Q8TE23 839 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 MORC4Q8TE76 937 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 DENND1AQ8TEH3 1009 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 DDX1Q92499 740 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 MIPEPQ99797 713 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 KIFC3Q9BVG8 833 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 NPHS2Q9NP85 383 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 UBN1Q9NPG3 1134 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 PI4K2BG5E9Z4 385 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 TCEA3O75764 348 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 CDR2Q01850 454 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 PARP6Q2NL67 630 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 PCNX4Q63HM2 1172 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 KAZNQ674X7 775 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 TMEM154Q6P9G4 183 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 DSTYKQ6XUX3 929 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 SH3BP5LQ7L8J4 393 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 PHC3Q8NDX5 983 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 SHC3Q92529 594 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 MKL1Q969V6 931 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 SEL1LQ9UBV2 794 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 KCNG1Q9UIX4 513 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 STARD13Q9Y3M8 1113 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 NEU2Q9Y3R4 380 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 MROH7Q68CQ1 1323 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 SLC16A4O15374 487 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 SORBS3O60504 671 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 SMIM24O75264 130 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 WFS1O76024 890 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 LUC7L3O95232 432 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 CFHP08603 1231 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 KRT10P13645 584 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 CA4P22748 312 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 TAS2R40P59535 323 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 MXRA7P84157 204 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 RNF220Q5VTB9 566 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 ACAD10Q6JQN1 1059 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 OTOAQ7RTW8 1153 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 XXYLT1Q8NBI6 393 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 ASAP3Q8TDY4 903 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 C10orf82Q8WW14 230 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 GRAMD1AQ96CP6 724 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 PRR11Q96HE9 360 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 ZCWPW1Q9H0M4 648 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 UVRAGQ9P2Y5 699 aa13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 COL14A1Q05707 1796 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-204ENST00000464764 GOLGA8SH3BPF8 625 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 GOLGA8MH3BSY2 632 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 FDX1P10109 184 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 GNAT1P11488 350 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 RFX1P22670 979 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 RFC5P40937 340 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 PPP2R5CQ13362 524 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 RC3H1Q5TC82 1133 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 FAM196AQ6ZSG2 479 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 RFX8Q6ZV50 586 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 AGGF1Q8N302 714 aaeCLIP13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 TAB3Q8N5C8 712 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 HELQQ8TDG4 1101 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 POMGNT1Q8WZA1 660 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 KLF6Q99612 283 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 CCDC77Q9BR77 488 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 DLGAP2Q9P1A6 1054 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 EDF1O60869 148 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 ATP6V1C1P21283 382 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 NOP14P78316 857 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 STAT4Q14765 748 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 LRRC8CQ8TDW0 803 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 MAK16Q9BXY0 300 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 NYAP2Q9P242 653 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms