RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 NHLH2Q02577 135 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 HDAC1Q13547 482 aaPredicted RBP5.28□□□□□ -1.56
USH2A-203ENST00000463147 MINDY4Q4G0A6 757 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 CCDC178Q5BJE1 867 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 C10orf62Q5T681 223 aaPredicted RBP5.28□□□□□ -1.56
USH2A-203ENST00000463147 TAS1R1Q7RTX1 841 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 SRRM1Q8IYB3 904 aaKnown RBP5.28□□□□□ -1.56
USH2A-203ENST00000463147 ZNF610Q8N9Z0 462 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 PJA1Q8NG27 643 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 JADE3Q92613 823 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 TEKT5Q96M29 485 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 ORAI2Q96SN7 254 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 SPON1Q9HCB6 807 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 CCM2LQ9NUG4 571 aaPredicted RBP5.28□□□□□ -1.56
USH2A-203ENST00000463147 RNF181Q9P0P0 153 aa5.28□□□□□ -1.56
USH2A-203ENST00000463147 TESQ9UGI8 421 aaKnown RBP5.28□□□□□ -1.56
USH2A-203ENST00000463147 B5MCH6 92 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 CREB3O43889 395 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 CFBP00751 764 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
USH2A-203ENST00000463147 SERPINB3P29508 390 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 LSP1P33241 339 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 GPR15P49685 360 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 GTF2H3Q13889 308 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 CDYL2Q8N8U2 506 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 PIK3C3Q8NEB9 887 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 ANKS1AQ92625 1134 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 ZNF496Q96IT1 587 aaPredicted RBP5.27□□□□□ -1.57
USH2A-203ENST00000463147 AIFM3Q96NN9 605 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 MYL10Q9BUA6 226 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 KMT5AQ9NQR1 393 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 TOMM22Q9NS69 142 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 TAGLN3Q9UI15 199 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 DNM3Q9UQ16 869 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 PCDHB6Q9Y5E3 794 aa5.27□□□□□ -1.57
USH2A-203ENST00000463147 MAST3O60307 1309 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 MYPNQ86TC9 1320 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 KLHL33A6NCF5 533 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 LEFTY2O00292 366 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 XPOTO43592 962 aaKnown RBP5.26□□□□□ -1.57
USH2A-203ENST00000463147 IL33O95760 270 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 IGLV2-14P01704 120 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 MYBP10242 640 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 NRG3P56975 720 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 FOXF2Q12947 444 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 MAPK7Q13164 816 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 ZNF267Q14586 743 aaPredicted RBP5.26□□□□□ -1.57
USH2A-203ENST00000463147 RRP12Q5JTH9 1297 aaKnown RBP5.26□□□□□ -1.57
USH2A-203ENST00000463147 GPR158Q5T848 1215 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 EFCAB12Q6NXP0 572 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 SPICE1Q8N0Z3 855 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 SLC35G2Q8TBE7 412 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 SCARB1Q8WTV0 552 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 KIAA1586Q9HCI6 787 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 PRDM11Q9NQV5 511 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 NOC2LQ9Y3T9 749 aaKnown RBP5.26□□□□□ -1.57
USH2A-203ENST00000463147 FPGT-TNNI3KV9GXZ4 949 aa5.26□□□□□ -1.57
USH2A-203ENST00000463147 FRMPD2Q68DX3 1309 aaPredicted RBP5.25□□□□□ -1.57
USH2A-203ENST00000463147 ST20-MTHFSA0A0A6YYL1 179 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 IFRD1O00458 451 aaPredicted RBP5.25□□□□□ -1.57
USH2A-203ENST00000463147 PROP1O75360 226 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 LY86O95711 162 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 FOSP01100 380 aaPredicted RBP5.25□□□□□ -1.57
USH2A-203ENST00000463147 C5AR1P21730 350 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 MPLP40238 635 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 CD69Q07108 199 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 DHX8Q14562 1220 aaKnown RBP5.25□□□□□ -1.57
USH2A-203ENST00000463147 BRD3Q15059 726 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 SPDYE7PQ495Y7 208 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 ARHGAP29Q52LW3 1261 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 COBLL1Q53SF7 1204 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 EFCAB2Q5VUJ9 269 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 SP5Q6BEB4 398 aaPredicted RBP5.25□□□□□ -1.57
USH2A-203ENST00000463147 OR10H5Q8NGA6 315 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 FBXO41Q8TF61 875 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 RTF1Q92541 710 aaKnown RBP5.25□□□□□ -1.57
USH2A-203ENST00000463147 SLC2A13Q96QE2 648 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 TAAR9Q96RI9 348 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 NUP88Q99567 741 aaPredicted RBP5.25□□□□□ -1.57
USH2A-203ENST00000463147 PRDM12Q9H4Q4 367 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 PRDM16Q9HAZ2 1276 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 DDX21Q9NR30 783 aaKnown RBP eCLIP5.25□□□□□ -1.57
USH2A-203ENST00000463147 USP25Q9UHP3 1055 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 SAP30BPQ9UHR5 308 aaKnown RBP5.25□□□□□ -1.57
USH2A-203ENST00000463147 SERPINB13Q9UIV8 391 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 FAM50BQ9Y247 325 aa5.25□□□□□ -1.57
USH2A-203ENST00000463147 UNC119BA6NIH7 251 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 IKBKBO14920 756 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 AP1G1O43747 822 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 KDM1AO60341 852 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 U2AF1L5P0DN76 240 aaPredicted RBP5.24□□□□□ -1.57
USH2A-203ENST00000463147 FDXRP22570 491 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 CD40P25942 277 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 MTNR1BP49286 362 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 U2AF1Q01081 240 aaKnown RBP eCLIP5.24□□□□□ -1.57
USH2A-203ENST00000463147 SRSF2Q01130 221 aaKnown RBP5.24□□□□□ -1.57
USH2A-203ENST00000463147 APBA1Q02410 837 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 OS9Q13438 667 aaPredicted RBP5.24□□□□□ -1.57
USH2A-203ENST00000463147 TP53BP2Q13625 1128 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 ACAP2Q15057 778 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms