RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ANKFY1Q9P2R3 1169 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 PTPRJQ12913 1337 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 LRRIQ4A6NIV6 560 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 MYBL1P10243 752 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 CHKAP35790 457 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 AUHQ13825 339 aaKnown RBP18.06■□□□□ 0.48
ACTB-207ENST00000462494 PSMD6Q15008 389 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 ZACNQ401N2 412 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 TMEM270Q6UE05 265 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 CROCCP2Q86T23 111 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 ZNF677Q86XU0 584 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 CCDC13Q8IYE1 715 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 REPS2Q8NFH8 660 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 TRIM11Q96F44 468 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 FAM81BQ96LP2 452 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 PRMT1Q99873 361 aaKnown RBP18.06■□□□□ 0.48
ACTB-207ENST00000462494 FAM118BQ9BPY3 351 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 AS3MTQ9HBK9 375 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 KIAA1586Q9HCI6 787 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 AVENQ9NQS1 362 aaPredicted RBP18.06■□□□□ 0.48
ACTB-207ENST00000462494 CYP39A1Q9NYL5 469 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 WHRNQ9P202 907 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 ZNF214Q9UL59 606 aaPredicted RBP18.06■□□□□ 0.48
ACTB-207ENST00000462494 PCDHB4Q9Y5E5 795 aa18.06■□□□□ 0.48
ACTB-207ENST00000462494 H0YCG3 227 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 O00370 1275 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 C4BPAP04003 597 aaKnown RBP18.05■□□□□ 0.48
ACTB-207ENST00000462494 DSG3P32926 999 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 SLC1A1P43005 524 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 ZNF280AP59817 542 aaPredicted RBP18.05■□□□□ 0.48
ACTB-207ENST00000462494 BPIFB4P59827 614 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 GNPTABQ3T906 1256 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 XKR3Q5GH77 459 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 SCYL3Q8IZE3 742 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 ATXN2LQ8WWM7 1075 aaKnown RBP18.05■□□□□ 0.48
ACTB-207ENST00000462494 CDHR1Q96JP9 859 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 OSBPL7Q9BZF2 842 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 STMN4Q9H169 189 aaPredicted RBP18.05■□□□□ 0.48
ACTB-207ENST00000462494 PIM2Q9P1W9 311 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 USTQ9Y2C2 406 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 GJA3Q9Y6H8 435 aa18.05■□□□□ 0.48
ACTB-207ENST00000462494 VNN1O95497 513 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 PTPRAP18433 802 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 IFNAR2P48551 515 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 SP2Q02086 613 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 ZBTB41Q5SVQ8 909 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 TRMT10CQ7L0Y3 403 aaKnown RBP18.04■□□□□ 0.48
ACTB-207ENST00000462494 MAIP1Q8WWC4 291 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 SLCO2A1Q92959 643 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 DDX27Q96GQ7 796 aaKnown RBP18.04■□□□□ 0.48
ACTB-207ENST00000462494 SNF8Q96H20 258 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 HAPLN2Q9GZV7 340 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 A1CFQ9NQ94 594 aaKnown RBP18.04■□□□□ 0.48
ACTB-207ENST00000462494 AAASQ9NRG9 546 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 RBAKQ9NYW8 714 aaPredicted RBP18.04■□□□□ 0.48
ACTB-207ENST00000462494 R3HDM2Q9Y2K5 976 aaKnown RBP18.04■□□□□ 0.48
ACTB-207ENST00000462494 COL11A1P12107 1806 aaPredicted RBP18.04■□□□□ 0.48
ACTB-207ENST00000462494 ARID2Q68CP9 1835 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 NFASCO94856 1347 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 TP73O15350 636 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 GAS8O95995 478 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 CYP1A1P04798 512 aaPredicted RBP18.04■□□□□ 0.48
ACTB-207ENST00000462494 SUPT20HL2P0C7V6 817 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 RALAP11233 206 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 HARSP12081 509 aaKnown RBP18.04■□□□□ 0.48
ACTB-207ENST00000462494 ITIH2P19823 946 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 GNA15P30679 374 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 ADCY8P40145 1251 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 ITGA8P53708 1063 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 CENPCQ03188 943 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 SPRED3Q2MJR0 410 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 SUPT20HL1Q3ZLR7 823 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 LIN9Q5TKA1 542 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 KCNV1Q6PIU1 500 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 MON1BQ7L1V2 547 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 DEPTORQ8TB45 409 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 ASAP3Q8TDY4 903 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 TMEM109Q9BVC6 243 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 DCLK3Q9C098 648 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 APOBEC3GQ9HC16 384 aaKnown RBP18.04■□□□□ 0.48
ACTB-207ENST00000462494 ADAM22Q9P0K1 906 aa18.04■□□□□ 0.48
ACTB-207ENST00000462494 K7ERI5 159 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 ATF2P15336 505 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 GMPSP49915 693 aaPredicted RBP18.03■□□□□ 0.48
ACTB-207ENST00000462494 CLDN10P78369 228 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 CUL2Q13617 745 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 SEZ6Q53EL9 994 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 DCAF15Q66K64 600 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 TAOK1Q7L7X3 1001 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 ZNF526Q8TF50 670 aaPredicted RBP18.03■□□□□ 0.48
ACTB-207ENST00000462494 GRK7Q8WTQ7 553 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 SCLT1Q96NL6 688 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 ZNF317Q96PQ6 595 aaPredicted RBP18.03■□□□□ 0.48
ACTB-207ENST00000462494 MSTO1Q9BUK6 570 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 ACAD9Q9H845 621 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 ZNF541Q9H0D2 1346 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 SPATA31C2B4DYI2 1134 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 PROSCO94903 275 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 GJB6O95452 261 aa18.03■□□□□ 0.48
ACTB-207ENST00000462494 VIMP08670 466 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms