RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RUSC1Q9BVN2 902 aa16.83■□□□□ 0.28
SKA3-204ENST00000462482 CYP4F11Q9HBI6 524 aa16.83■□□□□ 0.28
SKA3-204ENST00000462482 PTPRHQ9HD43 1115 aa16.83■□□□□ 0.28
SKA3-204ENST00000462482 ANKFY1Q9P2R3 1169 aa16.83■□□□□ 0.28
SKA3-204ENST00000462482 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.83■□□□□ 0.28
SKA3-204ENST00000462482 R4GN57 208 aa16.83■□□□□ 0.28
SKA3-204ENST00000462482 MYO10Q9HD67 2058 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 LAMTOR5O43504 91 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 ECI2O75521 394 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 GUCY2CP25092 1073 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 CDC25AP30304 524 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 MCM4P33991 863 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 MAGEA9P43362 315 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 ID4P47928 161 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 TOB1P50616 345 aaPredicted RBP16.82■□□□□ 0.28
SKA3-204ENST00000462482 SOX4Q06945 474 aaPredicted RBP16.82■□□□□ 0.28
SKA3-204ENST00000462482 NOLC1Q14978 699 aaKnown RBP eCLIP16.82■□□□□ 0.28
SKA3-204ENST00000462482 CTXN3Q4LDR2 81 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 CYP4A22Q5TCH4 519 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 TPGS2Q68CL5 300 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 IQCEQ6IPM2 695 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 ZNF280DQ6N043 979 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 C1orf186Q6ZWK4 172 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 DAW1Q8N136 415 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 NELL2Q99435 816 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 CORO1BQ9BR76 489 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 OSBPL6Q9BZF3 934 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 AVENQ9NQS1 362 aaPredicted RBP16.82■□□□□ 0.28
SKA3-204ENST00000462482 SPATA6Q9NWH7 488 aaPredicted RBP16.82■□□□□ 0.28
SKA3-204ENST00000462482 KCND2Q9NZV8 630 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 CNTN3Q9P232 1028 aa16.82■□□□□ 0.28
SKA3-204ENST00000462482 MRPS17Q9Y2R5 130 aaKnown RBP16.82■□□□□ 0.28
SKA3-204ENST00000462482 TDRD15B5MCY1 1934 aaKnown RBP16.81■□□□□ 0.28
SKA3-204ENST00000462482 ARHGEF37A1IGU5 675 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 FAM170BA6NMN3 283 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 SFI1A8K8P3 1242 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 H3BQV1 296 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 CLDN3O15551 220 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 ABLIM3O94929 683 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 SP9P0CG40 484 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 PLS3P13797 630 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 ATF2P15336 505 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 PROZP22891 400 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 IGFBP6P24592 240 aaPredicted RBP16.81■□□□□ 0.28
SKA3-204ENST00000462482 RAD51AP2Q09MP3 1159 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 ZBTB41Q5SVQ8 909 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 CD300LGQ6UXG3 332 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 TCEAL8Q8IYN2 117 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 BICD1Q96G01 975 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 ZMAT2Q96NC0 199 aaKnown RBP16.81■□□□□ 0.28
SKA3-204ENST00000462482 NTPCRQ9BSD7 190 aaKnown RBP16.81■□□□□ 0.28
SKA3-204ENST00000462482 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.81■□□□□ 0.28
SKA3-204ENST00000462482 DLGAP2Q9P1A6 1054 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 LARSQ9P2J5 1176 aaKnown RBP16.81■□□□□ 0.28
SKA3-204ENST00000462482 MAFFQ9ULX9 164 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 PLXNA3P51805 1871 aa16.81■□□□□ 0.28
SKA3-204ENST00000462482 WDR27A2RRH5 827 aa16.8■□□□□ 0.28
SKA3-204ENST00000462482 CPB1P15086 417 aa16.8■□□□□ 0.28
SKA3-204ENST00000462482 MAPK7Q13164 816 aa16.8■□□□□ 0.28
SKA3-204ENST00000462482 ZPBP2Q6X784 338 aa16.8■□□□□ 0.28
SKA3-204ENST00000462482 ZNF852Q6ZMS4 543 aa16.8■□□□□ 0.28
SKA3-204ENST00000462482 PDZD4Q76G19 769 aaPredicted RBP16.8■□□□□ 0.28
SKA3-204ENST00000462482 TAS1R3Q7RTX0 852 aa16.8■□□□□ 0.28
SKA3-204ENST00000462482 C18orf25Q96B23 403 aaPredicted RBP16.8■□□□□ 0.28
SKA3-204ENST00000462482 BORCS6Q96GS4 357 aa16.8■□□□□ 0.28
SKA3-204ENST00000462482 SUSD3Q96L08 255 aa16.8■□□□□ 0.28
SKA3-204ENST00000462482 ZNF512Q96ME7 567 aaPredicted RBP16.8■□□□□ 0.28
SKA3-204ENST00000462482 FBXL5Q9UKA1 691 aa16.8■□□□□ 0.28
SKA3-204ENST00000462482 C2orf16Q68DN1 1984 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 XPOTO43592 962 aaKnown RBP16.79■□□□□ 0.28
SKA3-204ENST00000462482 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
SKA3-204ENST00000462482 RABEP1Q15276 862 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 KYAT1Q16773 422 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 TPRG1Q6ZUI0 275 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 ERMP1Q7Z2K6 904 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 USP37Q86T82 979 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 SYT2Q8N9I0 419 aaPredicted RBP16.79■□□□□ 0.28
SKA3-204ENST00000462482 LEMD2Q8NC56 503 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 ELSPBP1Q96BH3 223 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 ZBTB45Q96K62 511 aaPredicted RBP16.79■□□□□ 0.28
SKA3-204ENST00000462482 TBC1D32Q96NH3 1257 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 MMTAG2Q9BU76 263 aaKnown RBP16.79■□□□□ 0.28
SKA3-204ENST00000462482 DDX23Q9BUQ8 820 aaKnown RBP16.79■□□□□ 0.28
SKA3-204ENST00000462482 OXCT2Q9BYC2 517 aaPredicted RBP16.79■□□□□ 0.28
SKA3-204ENST00000462482 PLEKHA5Q9HAU0 1116 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 ZFP14Q9HCL3 533 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 LTB4R2Q9NPC1 389 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 AFF4Q9UHB7 1163 aaKnown RBP16.79■□□□□ 0.28
SKA3-204ENST00000462482 FBXO4Q9UKT5 387 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 PCDHB8Q9UN66 801 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 INSL5Q9Y5Q6 135 aa16.79■□□□□ 0.28
SKA3-204ENST00000462482 VWA3AA6NCI4 1184 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 LRRN2O75325 713 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 MICAL2O94851 1124 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 CLTAP09496 248 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 PLA2G4BP0C869 781 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 MAPTP10636 758 aaKnown RBP16.78■□□□□ 0.28
SKA3-204ENST00000462482 CEBPBP17676 345 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 SCP2P22307 547 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 ATP2C1P98194 919 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms