RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 CXorf38Q8TB03 319 aa14.56□□□□□ -0.08
PBRM1-219ENST00000462207 ERGIC2Q96RQ1 377 aa14.56□□□□□ -0.08
PBRM1-219ENST00000462207 LSM14BQ9BX40 385 aaKnown RBP14.56□□□□□ -0.08
PBRM1-219ENST00000462207 INTS2Q9H0H0 1204 aaKnown RBP14.56□□□□□ -0.08
PBRM1-219ENST00000462207 CXXC1Q9P0U4 656 aaPredicted RBP14.56□□□□□ -0.08
PBRM1-219ENST00000462207 HCSTQ9UBK5 93 aa14.56□□□□□ -0.08
PBRM1-219ENST00000462207 DERAQ9Y315 318 aa14.56□□□□□ -0.08
PBRM1-219ENST00000462207 PTPRSQ13332 1948 aa14.56□□□□□ -0.08
PBRM1-219ENST00000462207 ZBBXA8MT70 800 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 N4BP1O75113 896 aaKnown RBP14.55□□□□□ -0.08
PBRM1-219ENST00000462207 PHACTR2O75167 634 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 CST3P01034 146 aaPredicted RBP14.55□□□□□ -0.08
PBRM1-219ENST00000462207 TPM3P06753 285 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 NAB2Q15742 525 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 EXOC3L4Q17RC7 722 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 GBP6Q6ZN66 633 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 FBXL13Q8NEE6 735 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 LMO3Q8TAP4 145 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 PCMTD1Q96MG8 357 aaPredicted RBP14.55□□□□□ -0.08
PBRM1-219ENST00000462207 LBHD1Q9BQE6 289 aaPredicted RBP14.55□□□□□ -0.08
PBRM1-219ENST00000462207 SIX2Q9NPC8 291 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 UBN1Q9NPG3 1134 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 FAM207AQ9NSI2 230 aaPredicted RBP14.55□□□□□ -0.08
PBRM1-219ENST00000462207 DPP3Q9NY33 737 aa14.55□□□□□ -0.08
PBRM1-219ENST00000462207 A0A1W2PQC6 194 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 INPPL1O15357 1258 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 FGBP02675 491 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 KRT19P08727 400 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 PON1P27169 355 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 POLR2BP30876 1174 aaKnown RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 LRMPQ12912 555 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 NCOA4Q13772 614 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 NOMO2Q5JPE7 1267 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 SPOPLQ6IQ16 392 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 DPY19L2P1Q6NXN4 242 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 GJB7Q6PEY0 223 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 TMC6Q7Z403 805 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 SPC24Q8NBT2 197 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 RABGGTAQ92696 567 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 CASD1Q96PB1 797 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 UBQLN1Q9UMX0 589 aaKnown RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 COQ4Q9Y3A0 265 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 GTPBP10A4D1E9 387 aaKnown RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 PMM2O15305 246 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 P4HA2O15460 535 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 BAIAP3O94812 1187 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 AMHP03971 560 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 THP07101 528 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 IGFBP6P24592 240 aaPredicted RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 MAGEA10P43363 369 aaPredicted RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 AP3M2P53677 418 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 MYL6P60660 151 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 GRIK3Q13003 919 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 PAN2Q504Q3 1202 aaKnown RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 PSRC1Q6PGN9 363 aaPredicted RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 TRIM65Q6PJ69 517 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 FAM43BQ6ZT52 329 aaPredicted RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 NT5DC4Q86YG4 428 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 BEST2Q8NFU1 509 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 CACTINQ8WUQ7 758 aaKnown RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 TBC1D13Q9NVG8 400 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 RAB20Q9NX57 234 aa14.54□□□□□ -0.08
PBRM1-219ENST00000462207 AJAP1Q9UKB5 411 aaPredicted RBP14.54□□□□□ -0.08
PBRM1-219ENST00000462207 CASTOR2A6NHX0 329 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 CLSTN1O94985 981 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 ZNF280BQ86YH2 543 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 ARHGEF19Q8IW93 802 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 ABI1Q8IZP0 508 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 EHBP1Q8NDI1 1231 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 TOP1MTQ969P6 601 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 PAAF1Q9BRP4 392 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 APOBEC3GQ9HC16 384 aaKnown RBP14.53□□□□□ -0.08
PBRM1-219ENST00000462207 ITGA11Q9UKX5 1188 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 AGAP1Q9UPQ3 857 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 NR2E3Q9Y5X4 410 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 TBKBP1A7MCY6 615 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 TDRD15B5MCY1 1934 aaKnown RBP14.53□□□□□ -0.08
PBRM1-219ENST00000462207 EFCAB14O75071 495 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 NOL4O94818 638 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 DDHD2O94830 711 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 CDC25BP30305 580 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 CLCN1P35523 988 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 KCNJ6P48051 423 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 C9orf57Q5W0N0 161 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 SPECC1LQ69YQ0 1117 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 URGCPQ8TCY9 931 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 XYLT2Q9H1B5 865 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 GANQ9H2C0 597 aa14.53□□□□□ -0.08
PBRM1-219ENST00000462207 ITIH6Q6UXX5 1313 aa14.52□□□□□ -0.09
PBRM1-219ENST00000462207 RNF225M0QZC1 329 aaPredicted RBP14.52□□□□□ -0.09
PBRM1-219ENST00000462207 DGKIO75912 1065 aa14.52□□□□□ -0.09
PBRM1-219ENST00000462207 NOP14P78316 857 aaKnown RBP14.52□□□□□ -0.09
PBRM1-219ENST00000462207 GOLGA8FQ08AF8 430 aa14.52□□□□□ -0.09
PBRM1-219ENST00000462207 GOLGA8DPQ0D2H9 430 aa14.52□□□□□ -0.09
PBRM1-219ENST00000462207 CETN1Q12798 172 aa14.52□□□□□ -0.09
PBRM1-219ENST00000462207 TRPC3Q13507 836 aa14.52□□□□□ -0.09
PBRM1-219ENST00000462207 C9orf50Q5SZB4 431 aa14.52□□□□□ -0.09
PBRM1-219ENST00000462207 DRC7Q8IY82 874 aa14.52□□□□□ -0.09
PBRM1-219ENST00000462207 KAT5Q92993 513 aa14.52□□□□□ -0.09
PBRM1-219ENST00000462207 TATDN2Q93075 761 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms