RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SLCO1B3Q9NPD5 702 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 TXLNGQ9NUQ3 528 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 ACTL7BQ9Y614 415 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 ANKRD31Q8N7Z5 1873 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 SMNDC1O75940 238 aaKnown RBP eCLIP19.61■□□□□ 0.73
HPS3-204ENST00000462030 ASMTLO95671 621 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 GPC3P51654 580 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 RNASELQ05823 741 aaKnown RBP19.61■□□□□ 0.73
HPS3-204ENST00000462030 ZNF365Q70YC5 407 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 MCOLN2Q8IZK6 566 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 PARD3BQ8TEW8 1205 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 CPA5Q8WXQ8 436 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 RAB3IPQ96QF0 476 aaPredicted RBP19.61■□□□□ 0.73
HPS3-204ENST00000462030 MXRA8Q9BRK3 442 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 PI4K2AQ9BTU6 479 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 KIF9Q9HAQ2 790 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 WFS1O76024 890 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 GCAP28676 217 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 ABL2P42684 1182 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 CCNHP51946 323 aaPredicted RBP19.61■□□□□ 0.73
HPS3-204ENST00000462030 ANKS1BQ7Z6G8 1248 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 VSIG1Q86XK7 387 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 ANKRD35Q8N283 1001 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 MICAL1Q8TDZ2 1067 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 KIFAP3Q92845 792 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 RIT2Q99578 217 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 CCDC77Q9BR77 488 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 FAM167BQ9BTA0 163 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 EHMT1Q9H9B1 1298 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 TMEM8AQ9HCN3 771 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 HAO1Q9UJM8 370 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 PHTF1Q9UMS5 762 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 COQ4Q9Y3A0 265 aa19.61■□□□□ 0.73
HPS3-204ENST00000462030 EIF4E1BA6NMX2 242 aaKnown RBP19.6■□□□□ 0.73
HPS3-204ENST00000462030 P4HBP07237 508 aaKnown RBP19.6■□□□□ 0.73
HPS3-204ENST00000462030 UNGP13051 313 aaPredicted RBP19.6■□□□□ 0.73
HPS3-204ENST00000462030 CENPCQ03188 943 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 RBM15Q96T37 977 aaKnown RBP eCLIP19.6■□□□□ 0.73
HPS3-204ENST00000462030 KIFC3Q9BVG8 833 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 LRMDAQ9H2I8 198 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 TDRD3Q9H7E2 651 aaKnown RBP19.6■□□□□ 0.73
HPS3-204ENST00000462030 RAB20Q9NX57 234 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 GRID1Q9ULK0 1009 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 SCN9AQ15858 1988 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 MAGEA4P43358 317 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 CCNG1P51959 295 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 SPP2Q13103 211 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 TAF11Q15544 211 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 TRABD2AQ86V40 505 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 FBXL13Q8NEE6 735 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 KCNH7Q9NS40 1196 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 STARD13Q9Y3M8 1113 aa19.6■□□□□ 0.73
HPS3-204ENST00000462030 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.6■□□□□ 0.73
HPS3-204ENST00000462030 FDX1P10109 184 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 GJC1P36383 396 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 TAS2R40P59535 323 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 MOGSQ13724 837 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 P3H1Q32P28 736 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 NAIF1Q69YI7 327 aaPredicted RBP19.59■□□□□ 0.73
HPS3-204ENST00000462030 CCDC89Q8N998 374 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 RANBP17Q9H2T7 1088 aaKnown RBP19.59■□□□□ 0.73
HPS3-204ENST00000462030 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.59■□□□□ 0.73
HPS3-204ENST00000462030 EXOC1LA0A1B0GW35 172 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 PEX11AO75192 247 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 YARSP54577 528 aaKnown RBP19.59■□□□□ 0.73
HPS3-204ENST00000462030 SETDB1Q15047 1291 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 HP1BP3Q5SSJ5 553 aaPredicted RBP19.59■□□□□ 0.73
HPS3-204ENST00000462030 MIS18BP1Q6P0N0 1132 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 RELL1Q8IUW5 271 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 IL31RAQ8NI17 732 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 MOV10L1Q9BXT6 1211 aaKnown RBP19.59■□□□□ 0.73
HPS3-204ENST00000462030 KIAA1683Q9H0B3 1180 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 ZMYND8Q9ULU4 1186 aaPredicted RBP19.59■□□□□ 0.73
HPS3-204ENST00000462030 MRPL11Q9Y3B7 192 aaKnown RBP19.59■□□□□ 0.73
HPS3-204ENST00000462030 UMODL1Q5DID0 1318 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 MYPNQ86TC9 1320 aa19.59■□□□□ 0.73
HPS3-204ENST00000462030 DHX15O43143 795 aaKnown RBP19.58■□□□□ 0.73
HPS3-204ENST00000462030 POTEJP0CG39 1038 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 GM2AP17900 193 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 KLRC2P26717 231 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 PARP6Q2NL67 630 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 CAPRIN2Q6IMN6 1127 aaKnown RBP19.58■□□□□ 0.73
HPS3-204ENST00000462030 GLIS1Q8NBF1 620 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 DENND1AQ8TEH3 1009 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 LRRC37BQ96QE4 947 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 CSRNP1Q96S65 589 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 SAYSD1Q9NPB0 183 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 AVENQ9NQS1 362 aaPredicted RBP19.58■□□□□ 0.73
HPS3-204ENST00000462030 USH1CQ9Y6N9 552 aa19.58■□□□□ 0.73
HPS3-204ENST00000462030 POC1B-GALNT4F8VUJ3 575 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 MAGEB2O15479 319 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 GNAZP19086 355 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 CD58P19256 250 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 GCKP35557 465 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 SLC1A1P43005 524 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 NCKAP1LP55160 1127 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 TRAF1Q13077 416 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 BLMHQ13867 455 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 ZYXQ15942 572 aaKnown RBP19.58■□□□□ 0.72
HPS3-204ENST00000462030 CCNG2Q16589 344 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms