RNA–Protein interactions for RNA: ENST00000461693.5

SDCCAG3-207, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-207ENST00000461693 CHD9Q3L8U1 2897 aa12.81□□□□□ -0.36
SDCCAG3-207ENST00000461693 GOLGA8IPA6NC78 632 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 GOLGA8JA6NMD2 632 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 PODXLO00592 558 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 NRP1O14786 923 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 N4BP1O75113 896 aaKnown RBP12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 AKAP3O75969 853 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 FGF18O76093 207 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 DDHD2O94830 711 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 STAU1O95793 577 aaKnown RBP12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 NFICP08651 508 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 MYOGP15173 224 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 TNNI1P19237 187 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 SLC11A1P49279 550 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 FXR1P51114 621 aaKnown RBP eCLIP12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 VAMP7P51809 220 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 SEZ6Q53EL9 994 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 TIGD5Q53EQ6 642 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 SMYD5Q6GMV2 418 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 ISM2Q6H9L7 571 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 DDX53Q86TM3 631 aaKnown RBP12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 ZNF280BQ86YH2 543 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 SPATA18Q8TC71 538 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 ENOX1Q8TC92 643 aaKnown RBP12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 GAS2L1Q99501 681 aaPredicted RBP12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 THAP9Q9H5L6 903 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 NGRNQ9NPE2 291 aaKnown RBP12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 INTS13Q9NVM9 706 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 ANK1P16157 1881 aa12.8□□□□□ -0.36
SDCCAG3-207ENST00000461693 ANO9A1A5B4 782 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 SOX1O00570 391 aaPredicted RBP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 SYN3O14994 580 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 PMM2O15305 246 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 MEFVO15553 781 aaPredicted RBP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 B3GAT3O94766 335 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 SOD2P04179 222 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 DLATP10515 647 aaKnown RBP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 POU3F3P20264 500 aaPredicted RBP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 ATICP31939 592 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 AFF1P51825 1210 aaKnown RBP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 PMS1P54277 932 aaKnown RBP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 TFAMQ00059 246 aaKnown RBP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 MYL5Q02045 173 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 SPAG1Q07617 926 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 CETN1Q12798 172 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 MYO1EQ12965 1108 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 GPM6BQ13491 265 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 SV2CQ496J9 727 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 KLHL23Q8NBE8 558 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 ARNTL2Q8WYA1 636 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 TAF4BQ92750 862 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 FAXDC2Q96IV6 333 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 FAM124BQ9H5Z6 455 aaPredicted RBP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 PDE11AQ9HCR9 933 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 TLR9Q9NR96 1032 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 MIOSQ9NXC5 875 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 DPP3Q9NY33 737 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 DNAJB4Q9UDY4 337 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 DSEQ9UL01 958 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 NUB1Q9Y5A7 615 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 IRAK3Q9Y616 596 aa12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 COL4A4P53420 1690 aaPredicted RBP12.79□□□□□ -0.36
SDCCAG3-207ENST00000461693 TRIM49BA6NDI0 452 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 CASTOR2A6NHX0 329 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 P4HA2O15460 535 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 LPXNO60711 386 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 TADA2AO75478 443 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 KIF4AO95239 1232 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 C1RP00736 705 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.364e-6■■■■■ 30.6
SDCCAG3-207ENST00000461693 TAF6P49848 677 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 CLCNKBP51801 687 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 RBP5P82980 135 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 CCDC40Q4G0X9 1142 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 C9orf57Q5W0N0 161 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 RDH13Q8NBN7 331 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 APPL2Q8NEU8 664 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 ANKRD20A12PQ8NF67 263 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 CCDC127Q96BQ5 260 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 MRPL38Q96DV4 380 aaKnown RBP12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 LRCH3Q96II8 777 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 CDCA3Q99618 268 aaPredicted RBP12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 DUSP9Q99956 384 aaKnown RBP12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 HERC2P3Q9BVR0 1158 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 MTMR12Q9C0I1 747 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 TTYH1Q9H313 450 aaPredicted RBP12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 VRTNQ9H8Y1 702 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 TMEM8AQ9HCN3 771 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 MARCH5Q9NX47 278 aa12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
SDCCAG3-207ENST00000461693 TUBGCP4Q9UGJ1 667 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms