RNA–Protein interactions for RNA: ENST00000461661.1

ITCH-203, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene ITCH, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-203ENST00000461661 PCDHGA9Q9Y5G4 932 aaKnown RBP3.69□□□□□ -1.82
ITCH-203ENST00000461661 PCDHGA8Q9Y5G5 932 aa3.69□□□□□ -1.82
ITCH-203ENST00000461661 PCDHGA7Q9Y5G6 932 aa3.69□□□□□ -1.82
ITCH-203ENST00000461661 PCDHGA6Q9Y5G7 932 aa3.69□□□□□ -1.82
ITCH-203ENST00000461661 PCDHGA3Q9Y5H0 932 aa3.69□□□□□ -1.82
ITCH-203ENST00000461661 SALL3Q9BXA9 1300 aa3.69□□□□□ -1.82
ITCH-203ENST00000461661 ZAR1LA6NP61 321 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 KIAA0355O15063 1070 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 ZFPL1O95159 310 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 ESRRBO95718 433 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 NUDT3O95989 172 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 MT-CO1P00395 513 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 CDK11BP21127 795 aaKnown RBP3.68□□□□□ -1.82
ITCH-203ENST00000461661 SLC6A4P31645 630 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 MPLP40238 635 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 CDKN1CP49918 316 aaPredicted RBP3.68□□□□□ -1.82
ITCH-203ENST00000461661 CTXN1P60606 82 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 NOMO3P69849 1222 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 CXADRP78310 365 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 BLOC1S1P78537 153 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 HSD11B2P80365 405 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 AMPD3Q01432 767 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 TARDBPQ13148 414 aaKnown RBP eCLIP3.68□□□□□ -1.82
ITCH-203ENST00000461661 MTMR1Q13613 665 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 CYP2A13Q16696 494 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 SPDYE7PQ495Y7 208 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 NOMO2Q5JPE7 1267 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 DACT2Q5SW24 774 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 FAM43AQ8N2R8 423 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 FITM2Q8N6M3 262 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.68□□□□□ -1.82
ITCH-203ENST00000461661 CAVIN3Q969G5 261 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 MARS2Q96GW9 593 aaKnown RBP3.68□□□□□ -1.82
ITCH-203ENST00000461661 PRDM13Q9H4Q3 707 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 RIOX1Q9H6W3 641 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 MKS1Q9NXB0 559 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 HSFX1Q9UBD0 423 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 TRHDEQ9UKU6 1024 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 LIMCH1Q9UPQ0 1083 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 IPPQ9Y573 584 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 NOX1Q9Y5S8 564 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 POLR2AP24928 1970 aaKnown RBP3.68□□□□□ -1.82
ITCH-203ENST00000461661 MAST3O60307 1309 aa3.68□□□□□ -1.82
ITCH-203ENST00000461661 COL11A2P13942 1736 aaPredicted RBP3.67□□□□□ -1.82
ITCH-203ENST00000461661 CDHR4A6H8M9 788 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 KLHL33A6NCF5 533 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 GABRDO14764 452 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 GPANK1O95872 356 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 ALAS1P13196 640 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 FDXRP22570 491 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 EDNRBP24530 442 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 PLA2G5P39877 138 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 GUCY2FP51841 1108 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 MXRA7P84157 204 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 SLFN5Q08AF3 891 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 ABCB5Q2M3G0 1257 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 PRIMA1Q86XR5 153 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 Q8NA96 180 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 IFI44Q8TCB0 444 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 NTN5Q8WTR8 489 aaPredicted RBP3.67□□□□□ -1.82
ITCH-203ENST00000461661 NUP133Q8WUM0 1156 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 RAB24Q969Q5 203 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 RNF31Q96EP0 1072 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 Q96MF0 132 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 GALNT9Q9HCQ5 603 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 ZNHIT2Q9UHR6 403 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 KCNE5Q9UJ90 142 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 PCDHA13Q9Y5I0 950 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 PCSK5Q92824 1860 aa3.67□□□□□ -1.82
ITCH-203ENST00000461661 KIAA0391O15091 583 aaKnown RBP3.66□□□□□ -1.82
ITCH-203ENST00000461661 HTRA2O43464 458 aaPredicted RBP3.66□□□□□ -1.82
ITCH-203ENST00000461661 PPFIA2O75334 1257 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 KATNA1O75449 491 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 SBK3P0C264 359 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 MYBL2P10244 700 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 VAV2P52735 878 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 MPP3Q13368 585 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 IL10RAQ13651 578 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 ACAP2Q15057 778 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 PCBP2Q15366 365 aaKnown RBP eCLIP3.66□□□□□ -1.828e-6■■■■□ 24
ITCH-203ENST00000461661 C3orf36Q3SXR2 165 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 PRR16Q569H4 304 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 RNF187Q5TA31 235 aaPredicted RBP3.66□□□□□ -1.82
ITCH-203ENST00000461661 DPY19L2P1Q6NXN4 242 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 SLC44A3Q8N4M1 653 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 PRPF38AQ8NAV1 312 aaKnown RBP3.66□□□□□ -1.82
ITCH-203ENST00000461661 BBC3Q96PG8 261 aaPredicted RBP3.66□□□□□ -1.82
ITCH-203ENST00000461661 DMRTA2Q96SC8 542 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 C11orf54Q9H0W9 315 aaPredicted RBP3.66□□□□□ -1.82
ITCH-203ENST00000461661 UNKLQ9H9P5 680 aaKnown RBP3.66□□□□□ -1.82
ITCH-203ENST00000461661 TDP1Q9NUW8 608 aa3.66□□□□□ -1.82
ITCH-203ENST00000461661 VSX1Q9NZR4 365 aaPredicted RBP3.66□□□□□ -1.82
ITCH-203ENST00000461661 SAP30BPQ9UHR5 308 aaKnown RBP3.66□□□□□ -1.82
ITCH-203ENST00000461661 MYADML2A6NDP7 307 aa3.65□□□□□ -1.83
ITCH-203ENST00000461661 FCER1AP12319 257 aa3.65□□□□□ -1.83
ITCH-203ENST00000461661 PTH2RP49190 550 aa3.65□□□□□ -1.83
ITCH-203ENST00000461661 EVA1CP58658 441 aa3.65□□□□□ -1.83
ITCH-203ENST00000461661 ZNF280AP59817 542 aaPredicted RBP3.65□□□□□ -1.83
ITCH-203ENST00000461661 KRT85P78386 507 aa3.65□□□□□ -1.83
ITCH-203ENST00000461661 CDC42EP1Q00587 391 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms