RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SCFD2Q8WU76 684 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 PPP2R3CQ969Q6 453 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 KIF12Q96FN5 646 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 MRPL48Q96GC5 212 aaKnown RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 AGPAT1Q99943 283 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 ANTXR1Q9H6X2 564 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 PARVBQ9HBI1 364 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 DOLKQ9UPQ8 538 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 USP15Q9Y4E8 981 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 POTEMA6NI47 508 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 SUPT3HB4E1H0 165 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 CFAP99D6REC4 459 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 FDX1P10109 184 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 LCP1P13796 627 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 SOX6P35712 828 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 ARHGEF7Q14155 803 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 OSBPL5Q9H0X9 879 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 C20orf96Q9NUD7 363 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 SLC16A3O15427 465 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 PHF2O75151 1096 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 RAD17O75943 681 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 ITIH2P19823 946 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 FGFR4P22455 802 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 SPRP35270 261 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 SESN2P58004 480 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 CDC42EP1Q00587 391 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 MAPRE1Q15691 268 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 COBLL1Q53SF7 1204 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 DALRD3Q5D0E6 543 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 TMEM154Q6P9G4 183 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 ANKMY2Q8IV38 441 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 GUF1Q8N442 669 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 TERB1Q8NA31 727 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 ARHGEF26Q96DR7 871 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 DCDC2Q9UHG0 476 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 ESYT3A0FGR9 886 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 RNF103O00237 685 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 STRNO43815 780 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 CDH16O75309 829 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 RGS2P41220 211 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 SNAP25P60880 206 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 HIST2H2ACQ16777 129 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 MFSD14CQ5VZR4 134 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 HIST2H2AA3Q6FI13 130 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 RCSD1Q6JBY9 416 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 ARMC6Q6NXE6 501 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 C4orf22Q6V702 233 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 RNPC3Q96LT9 517 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 KLHL31Q9H511 634 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 TASP1Q9H6P5 420 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 KDM5AP29375 1690 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 EIF4E1BA6NMX2 242 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 PPP1R37O75864 691 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 GH2P01242 217 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 ALBP02768 609 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 BRD2P25440 801 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 SOAT1P35610 550 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 SNRNP48Q6IEG0 339 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 STAG2Q8N3U4 1231 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 SYNDIG1Q9H7V2 258 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 TUBGCP4Q9UGJ1 667 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 ZC3H7BQ9UGR2 993 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 FBXO2Q9UK22 296 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 AGO2Q9UKV8 859 aaKnown RBP9.43□□□□□ -0.9
BRCA1-205ENST00000461221 PLEKHG1Q9ULL1 1385 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 SERPINB3P29508 390 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 GRIK1P39086 918 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 MDH1BQ5I0G3 518 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 AGBL2Q5U5Z8 902 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 KCNV1Q6PIU1 500 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 CCDC103Q8IW40 242 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 DNAJC9Q8WXX5 260 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 MTERF3Q96E29 417 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 DEPDC7Q96QD5 511 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 MED15Q96RN5 788 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 NPHS2Q9NP85 383 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 SEC31BQ9NQW1 1179 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 LATS2Q9NRM7 1088 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 CACNA2D2Q9NY47 1150 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 GABBR1Q9UBS5 961 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 CDY2AQ9Y6F7 541 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 CDY1Q9Y6F8 540 aa9.43□□□□□ -0.9
BRCA1-205ENST00000461221 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 USP1O94782 785 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 ZNF200P98182 395 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 OLFML2BQ68BL8 750 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 ZNF746Q6NUN9 644 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 C16orf62Q7Z3J2 963 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 ZNF473Q8WTR7 871 aaKnown RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 PPP1R36Q96LQ0 422 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 MTA3Q9BTC8 594 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 BSDC1Q9NW68 430 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 ADAM30Q9UKF2 790 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 ADGRG1Q9Y653 693 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 MRPS35P82673 323 aaKnown RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 PTK6Q13882 451 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 TRIP10Q15642 601 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 ADRM1Q16186 407 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 KBTBD12Q3ZCT8 623 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 FAM196AQ6ZSG2 479 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms