RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GEMIN8Q9NWZ8 242 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 RAI14Q9P0K7 980 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 TMEFF2Q9UIK5 374 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 HACL1Q9UJ83 578 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 SALL3Q9BXA9 1300 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 MYH2Q9UKX2 1941 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 RASSF10A6NK89 507 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 SMIM22K7EJ46 135 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 ZEB2O60315 1214 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 MSCO60682 206 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 IDH1O75874 414 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 BPIP17213 487 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 LTBRP36941 435 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 MKI67P46013 3256 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 ID4P47928 161 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 RBM5P52756 815 aaKnown RBP eCLIP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 PDE1AP54750 535 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 ITGA1P56199 1179 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 DYNLL1P63167 89 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 TMPRSS15P98073 1019 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 MECOMQ03112 1051 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 MCL1Q07820 350 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 PUM1Q14671 1186 aaKnown RBP eCLIP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 SART3Q15020 963 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 TESK1Q15569 626 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 SLC4A8Q2Y0W8 1093 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 DEFB115Q30KQ5 88 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 HSP90AB4PQ58FF6 505 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 CCDC158Q5M9N0 1113 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 KIF18BQ86Y91 864 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 ZC3H7AQ8IWR0 971 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 ZFPM1Q8IX07 1006 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 LGI4Q8N135 537 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 UNC80Q8N2C7 3258 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 NXPE1Q8N323 547 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 MIGA1Q8NAN2 632 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 MTMR8Q96EF0 704 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 C8orf48Q96LL4 319 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 SEC62Q99442 399 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 PUS7LQ9H0K6 701 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 VPS33BQ9H267 617 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 TDRD3Q9H7E2 651 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 MYOZ2Q9NPC6 264 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 RRAGDQ9NQL2 400 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 ECHDC1Q9NTX5 307 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 GNL3LQ9NVN8 582 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 ISY1Q9ULR0 285 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 X6R8D5 127 aa5.61□□□□□ -1.51
ATPAF1-203ENST00000460928 CACNA1AO00555 2505 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 TRIOBPQ9H2D6 2365 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 PASKQ96RG2 1323 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 MROH6A6NGR9 719 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 H7C1D1 291 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 ARVCFO00192 962 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 WNT10BO00744 389 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 UQCRFS1P1P0C7P4 283 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 PYGMP11217 842 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 GSPT1P15170 499 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 ATP5JP18859 108 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 MX1P20591 662 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 NEK2P51955 445 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 GTF2A2P52657 109 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 ZNF280AP59817 542 aaPredicted RBP5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 RPL11P62913 178 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 GRM1Q13255 1194 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 PRKG1Q13976 671 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 PPP2R5AQ15172 486 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 APOBEC3HQ6NTF7 200 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 CD300LDQ6UXZ3 194 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 LBX2Q6XYB7 198 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 MOB2Q70IA6 237 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 FAM124AQ86V42 546 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 CCDC103Q8IW40 242 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 FAM26EQ8N5C1 309 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 MAGEB6Q8N7X4 407 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 IGSF22Q8N9C0 903 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 AGBL3Q8NEM8 1001 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 DIO2Q92813 273 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 ZBED3Q96IU2 234 aaPredicted RBP5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 TRIM8Q9BZR9 551 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 TSPYL1Q9H0U9 437 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 VEZTQ9HBM0 779 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 ADARB2Q9NS39 739 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 GGA3Q9NZ52 723 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 GABBR1Q9UBS5 961 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 DENND2AQ9ULE3 1009 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 TIMM13Q9Y5L4 95 aaPredicted RBP5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 SCN4AP35499 1836 aa5.6□□□□□ -1.51
ATPAF1-203ENST00000460928 CCDC194A0A1B0GVG4 234 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 C9orf118A6NHY6 69 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 ZNF891A8MT65 544 aaPredicted RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 TCP10L2B9ZVM9 353 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 M0R2C6 588 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 CBX4O00257 560 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 TSPAN6O43657 245 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 PRKAB2O43741 272 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 GLRX3O76003 335 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 F2P00734 622 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 SRGAP2CP0DJJ0 459 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms