RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 MLXIPQ9HAP2 919 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 TUFT1Q9NNX1 390 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 XPNPEP3Q9NQH7 507 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 PCDHA7Q9UN72 937 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 HPSEQ9Y251 543 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 MYH9P35579 1960 aaKnown RBP6.31□□□□□ -1.4
PTPN12-209ENST00000460731 CEP290O15078 2479 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 GRIN2DO15399 1336 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 IGSF9BQ9UPX0 1349 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 MBLAC1A4D2B0 266 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-209ENST00000460731 ICMTO60725 284 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 ABL1P00519 1130 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 PGK1P00558 417 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 GLDCP23378 1020 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 ARNTP27540 789 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 TCF7P36402 384 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-209ENST00000460731 TECP42680 631 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 QARSP47897 775 aaKnown RBP6.3□□□□□ -1.4
PTPN12-209ENST00000460731 STAT5BP51692 787 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 ACLYP53396 1101 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 PSMC5P62195 406 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 PPP2R3AQ06190 1150 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 SNX17Q15036 470 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 BRDTQ58F21 947 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-209ENST00000460731 RESP18Q5W5W9 173 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 MIS18BP1Q6P0N0 1132 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 SHC4Q6S5L8 630 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 C22orf34Q6ZV56 151 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 RNF180Q86T96 592 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 CATSPER3Q86XQ3 398 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 CCDC60Q8IWA6 550 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-209ENST00000460731 OR6J1Q8NGC5 347 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 DEFB118Q96PH6 123 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 DIRC2Q96SL1 478 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 EIF2AK1Q9BQI3 630 aaKnown RBP6.3□□□□□ -1.4
PTPN12-209ENST00000460731 RAB34Q9BZG1 259 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 CSRNP2Q9H175 543 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 SMARCAD1Q9H4L7 1026 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 ZSWIM4Q9H7M6 989 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 SPC25Q9HBM1 224 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 ATP13A1Q9HD20 1204 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 PDLIM7Q9NR12 457 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 WRAP73Q9P2S5 460 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-209ENST00000460731 LRWD1Q9UFC0 647 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 EGFL7Q9UHF1 273 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 DOCK5Q9H7D0 1870 aa6.3□□□□□ -1.4
PTPN12-209ENST00000460731 IGKV6-21A0A0C4DH24 114 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 VWA3AA6NCI4 1184 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 H3BRB1 525 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 EIF1AYO14602 144 aaKnown RBP6.29□□□□□ -1.4
PTPN12-209ENST00000460731 ZEB2O60315 1214 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 DKC1O60832 514 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPN12-209ENST00000460731 MED24O75448 989 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 LGALS2P05162 132 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 ASGR1P07306 291 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 C6orf222P0C671 652 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-209ENST00000460731 TMEM253P0C7T8 217 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 HOXA5P20719 270 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 MARCKSP29966 332 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-209ENST00000460731 CNGA1P29973 690 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 PTPN11Q06124 597 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-209ENST00000460731 GRB10Q13322 594 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 STK38Q15208 465 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 UGCGQ16739 394 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 TMEM266Q2M3C6 531 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 TMEM119Q4V9L6 283 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 NAALADL2Q58DX5 795 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 XKR3Q5GH77 459 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 SWSAP1Q6NVH7 229 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 CNNM4Q6P4Q7 775 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 NFRKBQ6P4R8 1299 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 ATG14Q6ZNE5 492 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 MIER3Q7Z3K6 550 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 RPAINQ86UA6 219 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 SULF2Q8IWU5 870 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 ELOA2Q8IYF1 753 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-209ENST00000460731 ENGASEQ8NFI3 743 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 GPBAR1Q8TDU6 330 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 ATP8B4Q8TF62 1192 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 LRRC15Q8TF66 581 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 KCNN1Q92952 543 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 EPSTI1Q96J88 318 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 SPATA32Q96LK8 384 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 CLIC6Q96NY7 704 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 CTAGE1Q96RT6 745 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 MTG1Q9BT17 334 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-209ENST00000460731 RNPEPQ9H4A4 650 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 TUT1Q9H6E5 874 aaKnown RBP6.29□□□□□ -1.4
PTPN12-209ENST00000460731 KCNK12Q9HB15 430 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 ANKEF1Q9NU02 776 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 ERAP1Q9NZ08 941 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 RGL1Q9NZL6 768 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 DBR1Q9UK59 544 aaKnown RBP6.29□□□□□ -1.4
PTPN12-209ENST00000460731 FRMPD3Q5JV73 1810 aa6.29□□□□□ -1.4
PTPN12-209ENST00000460731 KAT6AQ92794 2004 aa6.28□□□□□ -1.4
PTPN12-209ENST00000460731 A0A087X0B3 334 aa6.28□□□□□ -1.4
PTPN12-209ENST00000460731 PP2D1A8MPX8 630 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms