RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 DCUN1D2Q6PH85 259 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 PADI6Q6TGC4 694 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 RIBC1Q8N443 379 aaPredicted RBP6.56□□□□□ -1.36
VPS13D-202ENST00000460333 CCT6BQ92526 530 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 SLC5A5Q92911 643 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 SNX24Q9Y343 169 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 MYPNQ86TC9 1320 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 hCG_2014768A0A024R1R8 64 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 LRRC53A6NM62 1247 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 KRT14P02533 472 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 PLS3P13797 630 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 MX2P20592 715 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 DSG3P32926 999 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 PGM1P36871 562 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 PTGER2P43116 358 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 NEK2P51955 445 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 HDAC4P56524 1084 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 BPIFB4P59827 614 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 HADHQ16836 314 aaKnown RBP6.56□□□□□ -1.36
VPS13D-202ENST00000460333 PDXDC1Q6P996 788 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 FRMD5Q7Z6J6 570 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 WDR75Q8IWA0 830 aaKnown RBP6.56□□□□□ -1.36
VPS13D-202ENST00000460333 ANKRD13AQ8IZ07 590 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 MCPH1Q8NEM0 835 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 PIGOQ8TEQ8 1089 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 RAPGEF5Q92565 580 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 ATG4CQ96DT6 458 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 MBOAT7Q96N66 472 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 RRAGCQ9HB90 399 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 NRXN2Q9P2S2 1712 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 SEPT3Q9UH03 358 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 COMMD10Q9Y6G5 202 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 MYH8P13535 1937 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 CNTNAP1P78357 1384 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 ANKRD31Q8N7Z5 1873 aa6.56□□□□□ -1.36
VPS13D-202ENST00000460333 SLC16A3O15427 465 aaKnown RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 MED24O75448 989 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 GFPT2O94808 682 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 ALDH1A1P00352 501 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 PTPRAP18433 802 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 RPS6P62753 249 aaKnown RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 BAATQ14032 418 aaPredicted RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 MESDQ14696 234 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 KCNV1Q6PIU1 500 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 RGS9BPQ6ZS82 235 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 FAM47EQ6ZV65 393 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 GPIHBP1Q8IV16 184 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 FAM186BQ8IYM0 893 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 PDZD8Q8NEN9 1154 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 FAM81AQ8TBF8 368 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 FNBP1Q96RU3 617 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 FOXP3Q9BZS1 431 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 PALMDQ9NP74 551 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 KCNH7Q9NS40 1196 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 LRCH1Q9Y2L9 728 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 PCDHA10Q9Y5I2 948 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 A0A0G2JND7 137 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 FAM86B1E9PN63 330 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 VWA5AO00534 786 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 KLRC4O43908 158 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 ACSL3O95573 720 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 SLC25A27O95847 323 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 NR3C2P08235 984 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 FAM86B2P0C5J1 330 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 SLURP2P0DP57 97 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 TNFRSF8P28908 595 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 TMEM259Q4ZIN3 620 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 MFSD14CQ5VZR4 134 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 OLFML2BQ68BL8 750 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 FOXR1Q6PIV2 292 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 MAEAQ7L5Y9 396 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 ZNF513Q8N8E2 541 aaPredicted RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 EIF1ADQ8N9N8 165 aaKnown RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 REEP2Q9BRK0 252 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 MMTAG2Q9BU76 263 aaKnown RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 UPF3AQ9H1J1 476 aaKnown RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 PPARGC1AQ9UBK2 798 aaKnown RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 USTQ9Y2C2 406 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 DLEC1Q9Y238 1755 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 TNPO2O14787 897 aaKnown RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 PDE5AO76074 875 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 NR3C1P04150 777 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 FAM200BP0CF97 657 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 VPS41P49754 854 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 SNRPFP62306 86 aaKnown RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 CDK17Q00537 523 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 DSG1Q02413 1049 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 TBCCQ15814 346 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 CYP4F22Q6NT55 531 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 CCDC80Q76M96 950 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 PCGF5Q86SE9 256 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 SIAH1Q8IUQ4 282 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 ETNPPLQ8TBG4 499 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 SYTL5Q8TDW5 730 aaPredicted RBP6.55□□□□□ -1.36
VPS13D-202ENST00000460333 GJA10Q969M2 543 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 CEP170P1Q96L14 293 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 ERGIC2Q96RQ1 377 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 ANLNQ9NQW6 1124 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 ZC4H2Q9NQZ6 224 aa6.55□□□□□ -1.36
VPS13D-202ENST00000460333 ANKEF1Q9NU02 776 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms