RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 BIN2Q9UBW5 565 aaPredicted RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 IRS2Q9Y4H2 1338 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 IGF2BP3O00425 579 aaKnown RBP eCLIP10.29□□□□□ -0.76
UFD1-205ENST00000459854 PIK3R2O00459 728 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 CXCL11O14625 94 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 TBC1D4O60343 1298 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 ZRANB2O95218 330 aaKnown RBP eCLIP10.29□□□□□ -0.763e-6■■□□□ 14.3
UFD1-205ENST00000459854 KRT19P08727 400 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 RUNX1T1Q06455 604 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 NAA30Q147X3 362 aaPredicted RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 KIF19Q2TAC6 998 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 ZKSCAN4Q969J2 545 aaPredicted RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 ISCUQ9H1K1 167 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 EML4Q9HC35 981 aaKnown RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 ST7Q9NRC1 585 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 RHBDL2Q9NX52 303 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 PCDHB4Q9Y5E5 795 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 FHOD1Q9Y613 1164 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 FRMPD2Q68DX3 1309 aaPredicted RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 SAC3D1A6NKF1 404 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 AP3B1O00203 1094 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 ZBED1O96006 694 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 FAM200BP0CF97 657 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 PMS1P54277 932 aaKnown RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 YTHDF3Q7Z739 585 aaKnown RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 SIX6OS1Q8N1H7 587 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 MSL3Q8N5Y2 521 aaKnown RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 KCTD6Q8NC69 237 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 FUT8Q9BYC5 575 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 WDR11Q9BZH6 1224 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 CCDC90BQ9GZT6 254 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 ADAMTS1Q9UHI8 967 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 MRPL11Q9Y3B7 192 aaKnown RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 A0A1B0GTH6 734 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 TMEM247A6NEH6 219 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 MANSC4A6NHS7 340 aaPredicted RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 F5H6K3 240 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 SRGAP2O75044 1071 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 TPP2P29144 1249 aaPredicted RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 CDC27P30260 824 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 SERPINB9P50453 376 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 YARSP54577 528 aaKnown RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 PPATQ06203 517 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 KLRC3Q07444 240 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 MTMR2Q13614 643 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 GPR141Q7Z602 305 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 MB21D2Q8IYB1 491 aaPredicted RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 RFWD2Q8NHY2 731 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 PIGOQ8TEQ8 1089 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 WDR24Q96S15 920 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 PARK7Q99497 189 aaKnown RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 OSBPL8Q9BZF1 889 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 UBN1Q9NPG3 1134 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 SMYD2Q9NRG4 433 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 ADA2Q9NZK5 511 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 CAB39Q9Y376 341 aaPredicted RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 NRXN2Q9P2S2 1712 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 CCL15-CCL14A0A0B4J2E2 113 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 UNCXA6NJT0 531 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 CAPN9O14815 690 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 COPB2P35606 906 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 HMGCS2P54868 508 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 CCL15Q16663 113 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 AASDHQ4L235 1098 aaPredicted RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 CD248Q9HCU0 757 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 SPEF2Q9C093 1822 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 ABLIM1O14639 778 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 FSBPO95073 299 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 ATP1A1P05023 1023 aaKnown RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 ATP5BP06576 529 aaKnown RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 TMEM191BP0C7N4 346 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 HMOX2P30519 316 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 SLC1A1P43005 524 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 SCTRP47872 440 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 KIAA1755Q5JYT7 1200 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 SYDE2Q5VT97 1194 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 IRGCQ6NXR0 463 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 RDH13Q8NBN7 331 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 RFFLQ8WZ73 363 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 EME1Q96AY2 570 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 ATAD3AQ9NVI7 634 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 BTBD7Q9P203 1132 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 ZNF212Q9UDV6 495 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 DCTN4Q9UJW0 460 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 LRCH1Q9Y2L9 728 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 COL1A1P02452 1464 aaPredicted RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 LIN7AO14910 233 aaPredicted RBP10.28□□□□□ -0.76
UFD1-205ENST00000459854 PRLRP16471 622 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 INHBEP58166 350 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 DAB2P98082 770 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 CYTH1Q15438 398 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 PCNX4Q63HM2 1172 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 FBXO11Q86XK2 927 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 ZFPM1Q8IX07 1006 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 DNAAF3Q8N9W5 541 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 TSSK1BQ9BXA7 367 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 TRABDQ9H4I3 376 aa10.28□□□□□ -0.76
UFD1-205ENST00000459854 GOLGA8JA6NMD2 632 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 XPOTO43592 962 aaKnown RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms