RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 CREMQ03060 361 aa22.56■■□□□ 1.2
VARS-218ENST00000459667 CD300LGQ6UXG3 332 aa22.56■■□□□ 1.2
VARS-218ENST00000459667 CD302Q8IX05 232 aa22.56■■□□□ 1.2
VARS-218ENST00000459667 FSIP1Q8NA03 581 aa22.56■■□□□ 1.2
VARS-218ENST00000459667 PAGE5Q96GU1 130 aa22.56■■□□□ 1.2
VARS-218ENST00000459667 APOL5Q9BWW9 433 aa22.56■■□□□ 1.2
VARS-218ENST00000459667 DZANK1Q9NVP4 752 aa22.56■■□□□ 1.2
VARS-218ENST00000459667 UBQLN1Q9UMX0 589 aaKnown RBP22.56■■□□□ 1.2
VARS-218ENST00000459667 USP15Q9Y4E8 981 aaPredicted RBP22.56■■□□□ 1.2
VARS-218ENST00000459667 VWA8A3KMH1 1905 aa22.56■■□□□ 1.2
VARS-218ENST00000459667 TTC28Q96AY4 2481 aa22.56■■□□□ 1.2
VARS-218ENST00000459667 PVALEFA0A1B0GWK0 134 aa22.55■■□□□ 1.2
VARS-218ENST00000459667 TRAPPC3O43617 180 aa22.55■■□□□ 1.2
VARS-218ENST00000459667 BRCC3P46736 316 aa22.55■■□□□ 1.2
VARS-218ENST00000459667 EHHADHQ08426 723 aa22.55■■□□□ 1.2
VARS-218ENST00000459667 PRSS55Q6UWB4 352 aaPredicted RBP22.55■■□□□ 1.2
VARS-218ENST00000459667 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.55■■□□□ 1.2
VARS-218ENST00000459667 PIK3R5Q8WYR1 880 aa22.55■■□□□ 1.2
VARS-218ENST00000459667 TSPAN18Q96SJ8 248 aa22.55■■□□□ 1.2
VARS-218ENST00000459667 FNIP2Q9P278 1114 aa22.55■■□□□ 1.2
VARS-218ENST00000459667 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.55■■□□□ 1.2
VARS-218ENST00000459667 CUL9Q8IWT3 2517 aa22.55■■□□□ 1.2
VARS-218ENST00000459667 ANK1P16157 1881 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 PLXNA3P51805 1871 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 TNFRSF10AO00220 468 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 EIF3DO15371 548 aaKnown RBP eCLIP22.54■■□□□ 1.2
VARS-218ENST00000459667 XPOTO43592 962 aaKnown RBP22.54■■□□□ 1.2
VARS-218ENST00000459667 CYP3A5P20815 502 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 GARTP22102 1010 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 ZBTB6Q15916 424 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 PSMD5Q16401 504 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 GLYCTKQ8IVS8 523 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 FBXL18Q96ME1 805 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 S1PR5Q9H228 398 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 GOLPH3LQ9H4A5 285 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 PRKAG3Q9UGI9 489 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 NUB1Q9Y5A7 615 aa22.54■■□□□ 1.2
VARS-218ENST00000459667 SPDYE4A6NLX3 237 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 I3L4J1 428 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 GLUD1P00367 558 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 RPL17P18621 184 aaKnown RBP22.53■■□□□ 1.2
VARS-218ENST00000459667 FGFR3P22607 806 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 LRPAP1P30533 357 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 JADE1Q6IE81 842 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 PDXDC1Q6P996 788 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 CRELD2Q6UXH1 353 aaPredicted RBP22.53■■□□□ 1.2
VARS-218ENST00000459667 EPM2AIP1Q7L775 607 aaPredicted RBP22.53■■□□□ 1.2
VARS-218ENST00000459667 LNX1Q8TBB1 728 aaPredicted RBP22.53■■□□□ 1.2
VARS-218ENST00000459667 SAAL1Q96ER3 474 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 CBWD1Q9BRT8 395 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 ASB7Q9H672 318 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 UBE4BO95155 1302 aa22.53■■□□□ 1.2
VARS-218ENST00000459667 LDHAP00338 332 aaKnown RBP22.52■■□□□ 1.2
VARS-218ENST00000459667 MYL1P05976 194 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 NFICP08651 508 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 TKTP29401 623 aaKnown RBP22.52■■□□□ 1.2
VARS-218ENST00000459667 MCM4P33991 863 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 POU5F1Q01860 360 aaKnown RBP22.52■■□□□ 1.2
VARS-218ENST00000459667 ITIH3Q06033 890 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 TMEM132DQ14C87 1099 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 RARS2Q5T160 578 aaKnown RBP22.52■■□□□ 1.2
VARS-218ENST00000459667 ARMCX5Q6P1M9 558 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 ADHFE1Q8IWW8 467 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 TMEM130Q8N3G9 435 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 BEST2Q8NFU1 509 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 ZNF507Q8TCN5 953 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 SUSD6Q92537 303 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 FAM213AQ9BRX8 229 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 SLC39A2Q9NP94 309 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 DERAQ9Y315 318 aa22.52■■□□□ 1.2
VARS-218ENST00000459667 KLRC4O43908 158 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 SSTR3P32745 418 aaPredicted RBP22.51■■□□□ 1.19
VARS-218ENST00000459667 HOXD13P35453 343 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 GUCY2FP51841 1108 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 ZP2Q05996 745 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 SPATA1Q5VX52 437 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 CES5AQ6NT32 575 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 PALB2Q86YC2 1186 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 C12orf76Q8N812 135 aaPredicted RBP22.51■■□□□ 1.19
VARS-218ENST00000459667 ZSWIM2Q8NEG5 633 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 ADAM7Q9H2U9 754 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 PCIF1Q9H4Z3 704 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 SFXN1Q9H9B4 322 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 MAN1C1Q9NR34 630 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 EXOC1Q9NV70 894 aa22.51■■□□□ 1.19
VARS-218ENST00000459667 GOLGA8IPA6NC78 632 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 GOLGA6L4A6NEF3 574 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 GOLGA8JA6NMD2 632 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 IL18RAPO95256 599 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 CBX2Q14781 532 aaPredicted RBP22.5■■□□□ 1.19
VARS-218ENST00000459667 ELMSAN1Q6PJG2 1045 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 KRBA2Q6ZNG9 492 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 BRSK2Q8IWQ3 736 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 NELFCDQ8IXH7 590 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 GJD3Q8N144 294 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 NOC3LQ8WTT2 800 aaKnown RBP22.5■■□□□ 1.19
VARS-218ENST00000459667 SCFD1Q8WVM8 642 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 POP1Q99575 1024 aaKnown RBP22.5■■□□□ 1.19
VARS-218ENST00000459667 CLSTN3Q9BQT9 956 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 CHMP5Q9NZZ3 219 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms