RNA–Protein interactions for RNA: ENST00000459628.5

GPHN-202, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 1,723 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-202ENST00000459628 C17orf80Q9BSJ5 609 aa13.74□□□□□ -0.21
GPHN-202ENST00000459628 CERS4Q9HA82 394 aa13.74□□□□□ -0.21
GPHN-202ENST00000459628 MAGEC2Q9UBF1 373 aaPredicted RBP13.74□□□□□ -0.21
GPHN-202ENST00000459628 UBQLN1Q9UMX0 589 aaKnown RBP13.74□□□□□ -0.21
GPHN-202ENST00000459628 DERAQ9Y315 318 aa13.74□□□□□ -0.21
GPHN-202ENST00000459628 C2CD2Q9Y426 696 aa13.74□□□□□ -0.21
GPHN-202ENST00000459628 CHD9Q3L8U1 2897 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 COL4A4P53420 1690 aaPredicted RBP13.73□□□□□ -0.21
GPHN-202ENST00000459628 BECN2A8MW95 431 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 XPOTO43592 962 aaKnown RBP13.73□□□□□ -0.21
GPHN-202ENST00000459628 CLSTN1O94985 981 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 LAG3P18627 525 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 CTNNB1P35222 781 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 MTIF2P46199 727 aaKnown RBP13.73□□□□□ -0.21
GPHN-202ENST00000459628 BCAR1P56945 870 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 SMAD3P84022 425 aaKnown RBP13.73□□□□□ -0.21
GPHN-202ENST00000459628 DSC1Q08554 894 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 BIRC3Q13489 604 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 NCAPHQ15003 741 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 C1orf220Q5T0J3 134 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 FAM114A1Q8IWE2 563 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 COLGALT1Q8NBJ5 622 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 TMC2Q8TDI7 906 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 CACTINQ8WUQ7 758 aaKnown RBP13.73□□□□□ -0.21
GPHN-202ENST00000459628 RSPH1Q8WYR4 309 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 TIFAQ96CG3 184 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 ZNF558Q96NG5 402 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 INTS13Q9NVM9 706 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 DPP3Q9NY33 737 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 SMTNL1A8MU46 457 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 KCNJ18B7U540 433 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 PPEF2O14830 753 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 GNA14O95837 355 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 ITGB3P05106 788 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 KRT19P08727 400 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 GCLMP48507 274 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 CLCNKBP51801 687 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 TAP1Q03518 808 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 KCNJ12Q14500 433 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 IQCB1Q15051 598 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 ZBTB6Q15916 424 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 DUOXA2Q1HG44 320 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 SCARA3Q6AZY7 606 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 KCNT2Q6UVM3 1135 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 USP37Q86T82 979 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 C1orf127Q8N9H9 656 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 RNF214Q8ND24 703 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 SLC28A3Q9HAS3 691 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 METTL14Q9HCE5 456 aaKnown RBP13.73□□□□□ -0.21
GPHN-202ENST00000459628 FAN1Q9Y2M0 1017 aa13.73□□□□□ -0.21
GPHN-202ENST00000459628 MYO9BQ13459 2157 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 SOX1O00570 391 aaPredicted RBP13.72□□□□□ -0.21
GPHN-202ENST00000459628 PODXLO00592 558 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 NRP1O14786 923 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 IKBKBO14920 756 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 PHACTR2O75167 634 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 CSPG5O95196 566 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 GALTP07902 379 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 LINC00271P0C7V0 271 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 IGFBP6P24592 240 aaPredicted RBP13.72□□□□□ -0.21
GPHN-202ENST00000459628 POLR2BP30876 1174 aaKnown RBP13.72□□□□□ -0.21
GPHN-202ENST00000459628 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
GPHN-202ENST00000459628 PPP3CAQ08209 521 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 LRIT3Q3SXY7 679 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 TMEM173Q86WV6 379 aaPredicted RBP13.72□□□□□ -0.21
GPHN-202ENST00000459628 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 FAM200AQ8TCP9 573 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 AAASQ9NRG9 546 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 CHD7Q9P2D1 2997 aa13.72□□□□□ -0.21
GPHN-202ENST00000459628 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.21
GPHN-202ENST00000459628 KIF4AO95239 1232 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 ALDH2P05091 517 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 ITGB1P05556 798 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 PRKCSHP14314 528 aaPredicted RBP13.71□□□□□ -0.21
GPHN-202ENST00000459628 TCP11X2Q5H9J9 407 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 CDKAL1Q5VV42 579 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 TDRD10Q5VZ19 366 aaKnown RBP13.71□□□□□ -0.21
GPHN-202ENST00000459628 TRAPPC11Q7Z392 1133 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 TRIM59Q8IWR1 403 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 C3orf58Q8NDZ4 430 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 BCL7CQ8WUZ0 217 aaPredicted RBP13.71□□□□□ -0.21
GPHN-202ENST00000459628 CLP1Q92989 425 aaKnown RBP13.71□□□□□ -0.21
GPHN-202ENST00000459628 SLC35C1Q96A29 364 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 UROC1Q96N76 676 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 TGS1Q96RS0 853 aaKnown RBP13.71□□□□□ -0.21
GPHN-202ENST00000459628 TSPAN18Q96SJ8 248 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 TMEM175Q9BSA9 504 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.71□□□□□ -0.218e-7■■■■■ 91.5
GPHN-202ENST00000459628 TAB2Q9NYJ8 693 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 AGAP1Q9UPQ3 857 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 PCDHB12Q9Y5F1 795 aa13.71□□□□□ -0.21
GPHN-202ENST00000459628 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.71□□□□□ -0.21
GPHN-202ENST00000459628 GOLGA6L19H0YKK7 550 aa13.7□□□□□ -0.22
GPHN-202ENST00000459628 I3L4J1 428 aa13.7□□□□□ -0.22
GPHN-202ENST00000459628 CAVIN2O95810 425 aa13.7□□□□□ -0.22
GPHN-202ENST00000459628 CYP3A5P20815 502 aa13.7□□□□□ -0.22
GPHN-202ENST00000459628 CDK11BP21127 795 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms