RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 DCLRE1AQ6PJP8 1040 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 OTUD6AQ7L8S5 288 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 KRT25Q7Z3Z0 450 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 C4orf19Q8IY42 314 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 SUMF1Q8NBK3 374 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 GPR152Q8TDT2 470 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 KCNB2Q92953 911 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 ZNF707Q96C28 371 aaPredicted RBP6.3□□□□□ -1.4
VPS8-214ENST00000458721 HINFPQ9BQA5 517 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 COLEC11Q9BWP8 271 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 BCO2Q9BYV7 579 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 NT5C3AQ9H0P0 336 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 PIDD1Q9HB75 910 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 ETNK1Q9HBU6 452 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 KCNMB3Q9NPA1 279 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 FBXW11Q9UKB1 542 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 ADAM28Q9UKQ2 775 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 PCDHA4Q9UN74 947 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 IPPQ9Y573 584 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 CACNA1IQ9P0X4 2223 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 COL4A2P08572 1712 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 KANSL1LA0AUZ9 987 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 MED19A0JLT2 244 aaPredicted RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 M0R2N6 131 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 NCAM2O15394 837 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 TGM5O43548 720 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 NARSO43776 548 aaKnown RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 FOXD2O60548 495 aaPredicted RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 LRP3O75074 770 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 XYLBO75191 536 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 CDC45O75419 566 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 CSDE1O75534 798 aaKnown RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 SSBP05455 408 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS8-214ENST00000458721 PSMA5P28066 241 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 MLH1P40692 756 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 OR1G1P47890 313 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 NLRP5P59047 1200 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 LAMTOR4Q0VGL1 99 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 PPP2R5DQ14738 602 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 EMC2Q15006 297 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 TLR1Q15399 786 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 ADCK5Q3MIX3 580 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 UBXN11Q5T124 520 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 FUT10Q6P4F1 479 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 SLC27A1Q6PCB7 646 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 LILRA6Q6PI73 481 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 CPLX2Q6PUV4 134 aaKnown RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 BLOC1S2Q6QNY1 142 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 LYPD4Q6UWN0 246 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 GET4Q7L5D6 327 aaPredicted RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 FERMT3Q86UX7 667 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 SLFN12Q8IYM2 578 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 BLIDQ8IZY5 108 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 PLPP7Q8NBV4 271 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 ZBTB44Q8NCP5 570 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 PRPF31Q8WWY3 499 aaKnown RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 PIK3R5Q8WYR1 880 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 NELL1Q92832 810 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 BRF1Q92994 677 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 ZNF668Q96K58 619 aaPredicted RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 CEP170P1Q96L14 293 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 PRIMPOLQ96LW4 560 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 TCEANC2Q96MN5 208 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 MYADMQ96S97 322 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 NELL2Q99435 816 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 LXNQ9BS40 222 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 TRIM6Q9C030 488 aaPredicted RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 CSRNP2Q9H175 543 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 EPC1Q9H2F5 836 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 ENAMQ9NRM1 1142 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 VPS54Q9P1Q0 977 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 DDX25Q9UHL0 483 aaKnown RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 VAV3Q9UKW4 847 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 CDH7Q9ULB5 785 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 KCNH3Q9ULD8 1083 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 NAP1L2Q9ULW6 460 aaPredicted RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 CA14Q9ULX7 337 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 MRPS17Q9Y2R5 130 aaKnown RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 PRG3Q9Y2Y8 225 aaPredicted RBP6.29□□□□□ -1.4
VPS8-214ENST00000458721 NUMBLQ9Y6R0 609 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 R4GN57 208 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 GPR179Q6PRD1 2367 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 VWA8A3KMH1 1905 aa6.29□□□□□ -1.4
VPS8-214ENST00000458721 CHD8Q9HCK8 2581 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 C2CD2LO14523 706 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 LAMTOR5O43504 91 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 EDIL3O43854 480 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 TBC1D4O60343 1298 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 TSPAN1O60635 241 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 RFPL2O75678 378 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 CDKL5O76039 1030 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 LYPLA2O95372 231 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 TDP2O95551 362 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 POMCP01189 267 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 CELA2BP08218 269 aaPredicted RBP6.28□□□□□ -1.4
VPS8-214ENST00000458721 XBP1P17861 261 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 RPS6KB1P23443 525 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 YWHABP31946 246 aaKnown RBP6.28□□□□□ -1.4
VPS8-214ENST00000458721 HSPA4P34932 840 aa6.28□□□□□ -1.4
VPS8-214ENST00000458721 GSK3AP49840 483 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms