RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 SIX2Q9NPC8 291 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 DNAJC12Q9UKB3 198 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 ARFGEF1Q9Y6D6 1849 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 TMEM110-MUSTN1A8MSY1 372 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 YBX3P16989 372 aaKnown RBP eCLIP14.47□□□□□ -0.091e-6■■□□□ 11.7
TOP3B-213ENST00000457179 CCND2P30279 289 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 EIF3BP55884 814 aaKnown RBP14.47□□□□□ -0.09
TOP3B-213ENST00000457179 MRPS35P82673 323 aaKnown RBP14.47□□□□□ -0.09
TOP3B-213ENST00000457179 BNIP1Q12981 228 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 MTHFD1LQ6UB35 978 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 CCDC60Q8IWA6 550 aaPredicted RBP14.47□□□□□ -0.09
TOP3B-213ENST00000457179 NEK9Q8TD19 979 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 PPP1R13LQ8WUF5 828 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.47□□□□□ -0.097e-9■■□□□ 12.6
TOP3B-213ENST00000457179 ARHGEF3Q9NR81 526 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 HOXC10Q9NYD6 342 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 CYP39A1Q9NYL5 469 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 UBIAD1Q9Y5Z9 338 aa14.47□□□□□ -0.09
TOP3B-213ENST00000457179 ZNF862O60290 1169 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 H2AFZP0C0S5 128 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 SP2Q02086 613 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 KLC1Q07866 573 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 ADCY1Q08828 1119 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 ZNF746Q6NUN9 644 aaPredicted RBP14.46□□□□□ -0.09
TOP3B-213ENST00000457179 H2AFVQ71UI9 128 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 VSIG10LQ86VR7 867 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 TRIM50Q86XT4 487 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 PALB2Q86YC2 1186 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 RMDN2Q96LZ7 410 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 TBC1D22BQ9NU19 505 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 CHCHD3Q9NX63 227 aaKnown RBP14.46□□□□□ -0.09
TOP3B-213ENST00000457179 PCDHA10Q9Y5I2 948 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 DENND3A2RUS2 1198 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 HNRNPDLO14979 420 aaKnown RBP14.46□□□□□ -0.09
TOP3B-213ENST00000457179 RGS20O76081 388 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 POTEJP0CG39 1038 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 STAT1P42224 750 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 PMS2P54278 862 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 GALCP54803 685 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 MUM1Q2TAK8 710 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 CCDC125Q86Z20 511 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 UCMAQ8WVF2 138 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 TMEM237Q96Q45 408 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 JPH1Q9HDC5 661 aaPredicted RBP14.46□□□□□ -0.09
TOP3B-213ENST00000457179 TAS2R14Q9NYV8 317 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 WDR35Q9P2L0 1181 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 SYNPO2Q9UMS6 1093 aa14.46□□□□□ -0.09
TOP3B-213ENST00000457179 FOXO6A8MYZ6 492 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 CALCAP01258 141 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 GAP43P17677 238 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 FGFR4P22455 802 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 SCNN1BP51168 640 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 ZNF211Q13398 564 aaPredicted RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 DPY19L2P1Q6NXN4 242 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 CATSPERGQ6ZRH7 1159 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 VPS36Q86VN1 386 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 FAM81AQ8TBF8 368 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 PCMTD2Q9NV79 361 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 BTBD7Q9P203 1132 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 SNX24Q9Y343 169 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 NR2E1Q9Y466 385 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 ZMYM2Q9UBW7 1377 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 POLR2AP24928 1970 aaKnown RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 LAMA2P24043 3122 aaKnown RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 CYP2C8P10632 490 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 KRT13P13646 458 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 SP100P23497 879 aaPredicted RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 PSMC5P62195 406 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 MAPK7Q13164 816 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 HHATQ5VTY9 493 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 STXBP4Q6ZWJ1 553 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 CBWD2Q8IUF1 395 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 LNX1Q8TBB1 728 aaPredicted RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 GLG1Q92896 1179 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 RNF25Q96BH1 459 aaPredicted RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 RBM41Q96IZ5 413 aaKnown RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 NUDCD1Q96RS6 583 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 METTL14Q9HCE5 456 aaKnown RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 KCNK9Q9NPC2 374 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 OLFML3Q9NRN5 406 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 FAM114A2Q9NRY5 505 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 TOPORSQ9NS56 1045 aaPredicted RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 LRRIQ4A6NIV6 560 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 FGGP02679 453 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 FMO5P49326 533 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 GALNTL6Q49A17 601 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 MAP1SQ66K74 1059 aaPredicted RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 PHLDB2Q86SQ0 1253 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 CDR2LQ86X02 465 aaPredicted RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 PPM1KQ8N3J5 372 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 EIF1ADQ8N9N8 165 aaKnown RBP14.45□□□□□ -0.1
TOP3B-213ENST00000457179 KMT5AQ9NQR1 393 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 ANKFY1Q9P2R3 1169 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 AFG3L2Q9Y4W6 797 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 SNCAIPQ9Y6H5 919 aa14.45□□□□□ -0.1
TOP3B-213ENST00000457179 EMSYQ7Z589 1322 aa14.44□□□□□ -0.1
TOP3B-213ENST00000457179 IGSF9BQ9UPX0 1349 aa14.44□□□□□ -0.1
TOP3B-213ENST00000457179 PLA2G6O60733 806 aa14.44□□□□□ -0.1
TOP3B-213ENST00000457179 CNGA1P29973 690 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms