RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 TTC3P53804 2025 aa15.27■□□□□ 0.03
LINC00887-204ENST00000456816 GRXCR1A8MXD5 290 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 ITGB3P05106 788 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 CYP3A5P20815 502 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 GTF2H1P32780 548 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 OR1G1P47890 313 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 PPP3CAQ08209 521 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 KCNH2Q12809 1159 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 FILIP1LQ4L180 1135 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 VWA3BQ502W6 1294 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 TRAPPC11Q7Z392 1133 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 ZNF280BQ86YH2 543 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 ZNF689Q96CS4 500 aaPredicted RBP15.26■□□□□ 0.03
LINC00887-204ENST00000456816 UROC1Q96N76 676 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 LIMA1Q9UHB6 759 aaKnown RBP15.26■□□□□ 0.03
LINC00887-204ENST00000456816 MSRAQ9UJ68 235 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 ITGA11Q9UKX5 1188 aa15.26■□□□□ 0.03
LINC00887-204ENST00000456816 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 PODXLO00592 558 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 DDHD2O94830 711 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 POLR2BP30876 1174 aaKnown RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 FMO5P49326 533 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 COPB1P53618 953 aaKnown RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 RBP5P82980 135 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 HTRA4P83105 476 aaPredicted RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 SOX4Q06945 474 aaPredicted RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 C1orf220Q5T0J3 134 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 FKBP15Q5T1M5 1219 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 TDRD10Q5VZ19 366 aaKnown RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 KRT39Q6A163 491 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 FAM109BQ6ICB4 259 aaPredicted RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 SV2AQ7L0J3 742 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 C1orf127Q8N9H9 656 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 CCDC150Q8NCX0 1101 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 ZNF516Q92618 1163 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 RABGGTAQ92696 567 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 DDX27Q96GQ7 796 aaKnown RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 IMPG2Q9BZV3 1241 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 HSD3B7Q9H2F3 369 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 NDST4Q9H3R1 872 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 NRDE2Q9H7Z3 1164 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 RC3H2Q9HBD1 1191 aaKnown RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 AAASQ9NRG9 546 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 HCSTQ9UBK5 93 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 CACNG4Q9UBN1 327 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 DNAJB4Q9UDY4 337 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 AGAP1Q9UPQ3 857 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 PRG3Q9Y2Y8 225 aaPredicted RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 MRPL42Q9Y6G3 142 aaKnown RBP15.25■□□□□ 0.03
LINC00887-204ENST00000456816 CEP290O15078 2479 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 RALGAPA2Q2PPJ7 1873 aa15.25■□□□□ 0.03
LINC00887-204ENST00000456816 LAG3P18627 525 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 RPL9P32969 192 aaKnown RBP15.24■□□□□ 0.03
LINC00887-204ENST00000456816 ALDH7A1P49419 539 aaKnown RBP15.24■□□□□ 0.03
LINC00887-204ENST00000456816 CLDN10P78369 228 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 FANCCQ00597 558 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 NCOA4Q13772 614 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 RAB30Q15771 203 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 ZBTB6Q15916 424 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 CBWD6Q4V339 395 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 CBWD3Q5JTY5 395 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 CBWD5Q5RIA9 395 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 COLGALT2Q8IYK4 626 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 TMEM130Q8N3G9 435 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 ZNF560Q96MR9 790 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 ZNF558Q96NG5 402 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 TMEM175Q9BSA9 504 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 FAN1Q9Y2M0 1017 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 NUB1Q9Y5A7 615 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 PCDHA11Q9Y5I1 949 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 CITO14578 2027 aa15.24■□□□□ 0.03
LINC00887-204ENST00000456816 LCHNA4D1U4 455 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 HLA-DRAP01903 254 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 C4BPAP04003 597 aaKnown RBP15.23■□□□□ 0.03
LINC00887-204ENST00000456816 ALDH2P05091 517 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 TPM3P06753 285 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 MYOGP15173 224 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 PBX3P40426 434 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 SLC11A1P49279 550 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 CLCNKBP51801 687 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 BCAR1P56945 870 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 UBXN1Q04323 297 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 DSC1Q08554 894 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 MYO1EQ12965 1108 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 NAB2Q15742 525 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 ZACNQ401N2 412 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 C9orf57Q5W0N0 161 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 FBXL13Q8NEE6 735 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 HASPINQ8TF76 798 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 PCMTD1Q96MG8 357 aaPredicted RBP15.23■□□□□ 0.03
LINC00887-204ENST00000456816 COLEC11Q9BWP8 271 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 CWH43Q9H720 699 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC00887-204ENST00000456816 PCDHB12Q9Y5F1 795 aa15.23■□□□□ 0.03
LINC00887-204ENST00000456816 CARNS1A5YM72 827 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 GOLGA6L3A6NEY3 463 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 LGALS16A8MUM7 142 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 P4HA2O15460 535 aa15.22■□□□□ 0.03
LINC00887-204ENST00000456816 B4GALT3O60512 393 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms