RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 DOT1LQ8TEK3 1739 aa10.96□□□□□ -0.66
CLIP4-208ENST00000456385 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 EIF3DO15371 548 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLIP4-208ENST00000456385 GSC2O15499 205 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 SORBS3O60504 671 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 PIAS1O75925 651 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 GAS8O95995 478 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 CALCAP01258 141 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 RXRBP28702 533 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 MAGEA4P43358 317 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 RBM5P52756 815 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLIP4-208ENST00000456385 OCRLQ01968 901 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 FASTKD3Q14CZ7 662 aaKnown RBP10.95□□□□□ -0.66
CLIP4-208ENST00000456385 MAPK6Q16659 721 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 QRICH1Q2TAL8 776 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 SLC45A4Q5BKX6 768 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 HS2ST1Q7LGA3 356 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 ZNF720Q7Z2F6 126 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 MORC4Q8TE76 937 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 ZNF75CPQ92670 426 aaPredicted RBP10.95□□□□□ -0.66
CLIP4-208ENST00000456385 ITFG2Q969R8 447 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 RBM41Q96IZ5 413 aaKnown RBP10.95□□□□□ -0.66
CLIP4-208ENST00000456385 MBOAT7Q96N66 472 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 TRAPPC9Q96Q05 1148 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 DCLK3Q9C098 648 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 DMAC2Q9NW81 257 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 SLAIN2Q9P270 581 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 NOCTQ9UK39 431 aaKnown RBP10.95□□□□□ -0.66
CLIP4-208ENST00000456385 WASF2Q9Y6W5 498 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 C2CD2LO14523 706 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 MSH4O15457 936 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 PRPF4O43172 522 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLIP4-208ENST00000456385 CYP1A2P05177 515 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 GSTT1P30711 240 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 NEK3P51956 506 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 SLC34A1Q06495 639 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 NFIXQ14938 502 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 IZUMO3Q5VZ72 239 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 CLEC4GQ6UXB4 293 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 RGS9BPQ6ZS82 235 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 TPH2Q8IWU9 490 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 SCYL3Q8IZE3 742 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 ZSWIM2Q8NEG5 633 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 SMC6Q96SB8 1091 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 NAP1L4Q99733 375 aaKnown RBP10.95□□□□□ -0.66
CLIP4-208ENST00000456385 BTBD10Q9BSF8 475 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 PARVGQ9HBI0 331 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 KRT82Q9NSB4 513 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 VAV3Q9UKW4 847 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 NEU2Q9Y3R4 380 aa10.95□□□□□ -0.66
CLIP4-208ENST00000456385 ROBO1Q9Y6N7 1651 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 A0A0G2JND7 137 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 PLSCR1O15162 318 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 CHMP2AO43633 222 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 PSMG1O95456 288 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 CYP1A1P04798 512 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-208ENST00000456385 GSTA2P09210 222 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 SSR1P43307 286 aaKnown RBP10.94□□□□□ -0.66
CLIP4-208ENST00000456385 FMO1Q01740 532 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 USP4Q13107 963 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 C2CD6Q53TS8 623 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 ZC3H12AQ5D1E8 599 aaKnown RBP10.94□□□□□ -0.66
CLIP4-208ENST00000456385 SLC10A5Q5PT55 438 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 PCNX4Q63HM2 1172 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 LVRNQ6Q4G3 990 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 C1orf186Q6ZWK4 172 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 FAM178BQ8IXR5 827 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 ATL2Q8NHH9 583 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 CRYGNQ8WXF5 182 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 ALG13Q9NP73 1137 aaKnown RBP10.94□□□□□ -0.66
CLIP4-208ENST00000456385 SAYSD1Q9NPB0 183 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 KCNQ5Q9NR82 932 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 FBXO6Q9NRD1 293 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-208ENST00000456385 G3BP2Q9UN86 482 aaKnown RBP10.94□□□□□ -0.66
CLIP4-208ENST00000456385 RPL26L1Q9UNX3 145 aaKnown RBP10.94□□□□□ -0.66
CLIP4-208ENST00000456385 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLIP4-208ENST00000456385 NHSQ6T4R5 1651 aa10.94□□□□□ -0.66
CLIP4-208ENST00000456385 IGKV6D-41A0A0C4DH26 115 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 MAGEA13PA6NCF6 341 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 C2orf71A6NGG8 1288 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 GYG2O15488 501 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 SLC26A4O43511 780 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 CCDC22O60826 627 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 GZMAP12544 262 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 GAP43P17677 238 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 TM4SF1P30408 202 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 PIK3CAP42336 1068 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 CAV1Q03135 178 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 P3H1Q32P28 736 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 WDR72Q3MJ13 1102 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 ODR4Q5SWX8 454 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 HHATQ5VTY9 493 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 LLGL2Q6P1M3 1020 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 RINLQ6ZS11 566 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 ZNF365Q70YC5 407 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 GLIS1Q8NBF1 620 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 MAIP1Q8WWC4 291 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 PTCD3Q96EY7 689 aaKnown RBP10.93□□□□□ -0.66
CLIP4-208ENST00000456385 BICD1Q96G01 975 aa10.93□□□□□ -0.66
CLIP4-208ENST00000456385 KREMEN1Q96MU8 473 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms