RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 PPP2R3AQ06190 1150 aa18.88■□□□□ 0.61
USP39-208ENST00000455732 POSTNQ15063 836 aa18.88■□□□□ 0.61
USP39-208ENST00000455732 ZBTB41Q5SVQ8 909 aa18.88■□□□□ 0.61
USP39-208ENST00000455732 DCLRE1AQ6PJP8 1040 aa18.88■□□□□ 0.61
USP39-208ENST00000455732 STXBP4Q6ZWJ1 553 aa18.88■□□□□ 0.61
USP39-208ENST00000455732 B3GALT6Q96L58 329 aa18.88■□□□□ 0.61
USP39-208ENST00000455732 TMEM206Q9H813 350 aa18.88■□□□□ 0.61
USP39-208ENST00000455732 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.88■□□□□ 0.61
USP39-208ENST00000455732 SERTAD1Q9UHV2 236 aa18.88■□□□□ 0.61
USP39-208ENST00000455732 EIF3DO15371 548 aaKnown RBP eCLIP18.87■□□□□ 0.61
USP39-208ENST00000455732 MYL1P05976 194 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 ANK1P16157 1881 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 ADSSP30520 456 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 RPL9P32969 192 aaKnown RBP18.87■□□□□ 0.61
USP39-208ENST00000455732 SYKP43405 635 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 FAM26FQ5R3K3 315 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 KIAA1841Q6NSI8 718 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 KANK3Q6NY19 840 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 CD300LGQ6UXG3 332 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 EPM2AIP1Q7L775 607 aaPredicted RBP18.87■□□□□ 0.61
USP39-208ENST00000455732 RNF135Q8IUD6 432 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 CD302Q8IX05 232 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 C12orf76Q8N812 135 aaPredicted RBP18.87■□□□□ 0.61
USP39-208ENST00000455732 HASPINQ8TF76 798 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 FBXL18Q96ME1 805 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 RPF1Q9H9Y2 349 aaKnown RBP18.87■□□□□ 0.61
USP39-208ENST00000455732 GOLGA2P5Q9HBQ8 144 aa18.87■□□□□ 0.61
USP39-208ENST00000455732 AGO2Q9UKV8 859 aaKnown RBP18.87■□□□□ 0.61
USP39-208ENST00000455732 CIZ1Q9ULV3 898 aaPredicted RBP18.87■□□□□ 0.61
USP39-208ENST00000455732 DOCK6Q96HP0 2047 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 UBE4BO95155 1302 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 PODXLO00592 558 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 DCXO43602 365 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 B3GAT3O94766 335 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 C1RP00736 705 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 ADH1AP07327 375 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 ALADP13716 330 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 CYP3A5P20815 502 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 GARTP22102 1010 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 IGFBP6P24592 240 aaPredicted RBP18.86■□□□□ 0.61
USP39-208ENST00000455732 NDUFA8P51970 172 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 CREMQ03060 361 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 CUL4BQ13620 913 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 ZBTB6Q15916 424 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 RARS2Q5T160 578 aaKnown RBP18.86■□□□□ 0.61
USP39-208ENST00000455732 CES5AQ6NT32 575 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 FSIP1Q8NA03 581 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 C3orf58Q8NDZ4 430 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 FEZF2Q8TBJ5 459 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 POMGNT1Q8WZA1 660 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 C18orf25Q96B23 403 aaPredicted RBP18.86■□□□□ 0.61
USP39-208ENST00000455732 PAGE5Q96GU1 130 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 BLZF1Q9H2G9 400 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 IKZF4Q9H2S9 585 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 GDPD2Q9HCC8 539 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 TECTAO75443 2155 aa18.86■□□□□ 0.61
USP39-208ENST00000455732 LACTBL1A8MY62 500 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 PRPF6O94906 941 aaKnown RBP18.85■□□□□ 0.61
USP39-208ENST00000455732 CASP1P29466 404 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 AFMP43652 599 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 RTP2Q5QGT7 225 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.85■□□□□ 0.61
USP39-208ENST00000455732 GRAMD1CQ8IYS0 662 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 SYCP3Q8IZU3 236 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 GLIS3Q8NEA6 775 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 RIN2Q8WYP3 895 aaPredicted RBP18.85■□□□□ 0.61
USP39-208ENST00000455732 PIK3R5Q8WYR1 880 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 HPS3Q969F9 1004 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 RPGRIP1Q96KN7 1286 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 NECTIN4Q96NY8 510 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 TTPALQ9BTX7 342 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 POMKQ9H5K3 350 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 ASB7Q9H672 318 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 SFXN1Q9H9B4 322 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 TUBGCP4Q9UGJ1 667 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 UBQLN1Q9UMX0 589 aaKnown RBP18.85■□□□□ 0.61
USP39-208ENST00000455732 DERAQ9Y315 318 aa18.85■□□□□ 0.61
USP39-208ENST00000455732 ARIH1Q9Y4X5 557 aaPredicted RBP18.85■□□□□ 0.61
USP39-208ENST00000455732 KIAA0391O15091 583 aaKnown RBP18.84■□□□□ 0.61
USP39-208ENST00000455732 XPOTO43592 962 aaKnown RBP18.84■□□□□ 0.61
USP39-208ENST00000455732 TRAPPC3O43617 180 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 WEE2P0C1S8 567 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 FGFR3P22607 806 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 LRPAP1P30533 357 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 MTHFRP42898 656 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 BMT2Q1RMZ1 405 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 FAM171A1Q5VUB5 890 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 PDXDC1Q6P996 788 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 CRELD2Q6UXH1 353 aaPredicted RBP18.84■□□□□ 0.61
USP39-208ENST00000455732 ZNF507Q8TCN5 953 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 KIF12Q96FN5 646 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 GOLPH3LQ9H4A5 285 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 MAN1C1Q9NR34 630 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 MUTYHQ9UIF7 546 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 C2CD2Q9Y426 696 aa18.84■□□□□ 0.61
USP39-208ENST00000455732 DOCK8Q8NF50 2099 aa18.83■□□□□ 0.61
USP39-208ENST00000455732 PRR33A8MZF0 331 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 KLRC4O43908 158 aa18.83■□□□□ 0.6
USP39-208ENST00000455732 LDHAP00338 332 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms