RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 SLC9A7Q96T83 725 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 PAAF1Q9BRP4 392 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 DPP3Q9NY33 737 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 SIX4Q9UIU6 781 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 LAMA3Q16787 3333 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 FSD2A1L4K1 749 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 TEX33O43247 280 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 AFPP02771 609 aaKnown RBP11.61□□□□□ -0.55
SYPL1-202ENST00000455385 TMEM191BP0C7N4 346 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 GTF2H1P32780 548 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 RABGGTBP53611 331 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 DSC1Q08554 894 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 GRIK3Q13003 919 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 PTPN21Q16825 1174 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 USP37Q86T82 979 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 NT5DC4Q86YG4 428 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 COLGALT2Q8IYK4 626 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 URGCPQ8TCY9 931 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 CACTINQ8WUQ7 758 aaKnown RBP11.61□□□□□ -0.55
SYPL1-202ENST00000455385 SEMA4DQ92854 862 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 TSPAN18Q96SJ8 248 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 MTIF3Q9H2K0 278 aaKnown RBP11.61□□□□□ -0.55
SYPL1-202ENST00000455385 PRO3102Q9H379 93 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 CWH43Q9H720 699 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 NRDE2Q9H7Z3 1164 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 TMEM8AQ9HCN3 771 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 KANSL3Q9P2N6 904 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 DNAJB4Q9UDY4 337 aa11.61□□□□□ -0.55
SYPL1-202ENST00000455385 UBQLN1Q9UMX0 589 aaKnown RBP11.61□□□□□ -0.55
SYPL1-202ENST00000455385 CASTOR2A6NHX0 329 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 SERPINC1P01008 464 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 MYOGP15173 224 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 CYP3A5P20815 502 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 KRT39Q6A163 491 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 BEST2Q8NFU1 509 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 TAS1R2Q8TE23 839 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 ANKRD36BP1Q96IX9 119 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 YME1L1Q96TA2 773 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
SYPL1-202ENST00000455385 A0A1B0GTH6 734 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 ANO9A1A5B4 782 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 LCHNA4D1U4 455 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 F8W810 466 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 TNNC2P02585 160 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 ITGB3P05106 788 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 CLCNKBP51801 687 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 AP3M2P53677 418 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
SYPL1-202ENST00000455385 KCNMA1Q12791 1236 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 TUSC3Q13454 348 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 NR1I3Q14994 352 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 UVSSAQ2YD98 709 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 C9orf57Q5W0N0 161 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 CD300LGQ6UXG3 332 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 ANKRD20A12PQ8NF67 263 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 LMO3Q8TAP4 145 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 RAD9AQ99638 391 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 CRACR2AQ9BSW2 395 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 ZBED2Q9BTP6 218 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 SLC38A7Q9NVC3 462 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 IFNKQ9P0W0 207 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 COQ4Q9Y3A0 265 aa11.6□□□□□ -0.55
SYPL1-202ENST00000455385 SCN1AP35498 2009 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 LGALS16A8MUM7 142 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 PES1O00541 588 aaKnown RBP11.59□□□□□ -0.55
SYPL1-202ENST00000455385 PIRO00625 290 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 PMM2O15305 246 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 STX10O60499 249 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 LINC00271P0C7V0 271 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 LRPAP1P30533 357 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 POLR2BP30876 1174 aaKnown RBP11.59□□□□□ -0.55
SYPL1-202ENST00000455385 PBX3P40426 434 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 MXI1P50539 228 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 UBASH3AP57075 661 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 BIRC3Q13489 604 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 BTG3Q14201 252 aaPredicted RBP11.59□□□□□ -0.55
SYPL1-202ENST00000455385 UPP1Q16831 310 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 C3orf58Q8NDZ4 430 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.59□□□□□ -0.553e-6■■■■■ 40.4
SYPL1-202ENST00000455385 AGAP1Q9UPQ3 857 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 INSL6Q9Y581 213 aa11.59□□□□□ -0.55
SYPL1-202ENST00000455385 MRPL42Q9Y6G3 142 aaKnown RBP11.59□□□□□ -0.55
SYPL1-202ENST00000455385 TLL1O43897 1013 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 PHACTR2O75167 634 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 ARHGEF15O94989 841 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 HLA-DRAP01903 254 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 KRT19P08727 400 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 SLC9A1P19634 815 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 MYL6P60660 151 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 APBA1Q02410 837 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 EPC2Q52LR7 807 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 DPY19L2P1Q6NXN4 242 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 CMTR2Q8IYT2 770 aaKnown RBP11.58□□□□□ -0.56
SYPL1-202ENST00000455385 LRRC43Q8N309 656 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
SYPL1-202ENST00000455385 PI4K2AQ9BTU6 479 aa11.58□□□□□ -0.56
SYPL1-202ENST00000455385 MRPL9Q9BYD2 267 aaKnown RBP11.58□□□□□ -0.56
SYPL1-202ENST00000455385 XPO4Q9C0E2 1151 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms