RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 LNX1Q8TBB1 728 aaPredicted RBP27.07■■□□□ 1.92
MSH2-203ENST00000454849 NOC3LQ8WTT2 800 aaKnown RBP27.07■■□□□ 1.92
MSH2-203ENST00000454849 HVCN1Q96D96 273 aa27.07■■□□□ 1.92
MSH2-203ENST00000454849 DDX27Q96GQ7 796 aaKnown RBP27.07■■□□□ 1.92
MSH2-203ENST00000454849 C7orf25Q9BPX7 421 aa27.07■■□□□ 1.92
MSH2-203ENST00000454849 ADAM7Q9H2U9 754 aa27.07■■□□□ 1.92
MSH2-203ENST00000454849 PLEKHA5Q9HAU0 1116 aa27.07■■□□□ 1.92
MSH2-203ENST00000454849 MAN1C1Q9NR34 630 aa27.07■■□□□ 1.92
MSH2-203ENST00000454849 PRKAG3Q9UGI9 489 aa27.07■■□□□ 1.92
MSH2-203ENST00000454849 MUC3AQ02505 3323 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 CUL4BQ13620 913 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 PSMD5Q16401 504 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 JADE1Q6IE81 842 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 SLFN12LQ6IEE8 588 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 SAAL1Q96ER3 474 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 CLSTN3Q9BQT9 956 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 PCIF1Q9H4Z3 704 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 EPHX3Q9H6B9 360 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 DZANK1Q9NVP4 752 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 EXOC7Q9UPT5 735 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 ATP6V1DQ9Y5K8 247 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 STYXL1Q9Y6J8 313 aa27.06■■□□□ 1.92
MSH2-203ENST00000454849 TMEM189-UBE2V1I3L0A0 370 aa27.05■■□□□ 1.92
MSH2-203ENST00000454849 GLUD1P00367 558 aa27.05■■□□□ 1.92
MSH2-203ENST00000454849 CMA1P23946 247 aa27.05■■□□□ 1.92
MSH2-203ENST00000454849 ELAVL2Q12926 359 aaKnown RBP27.05■■□□□ 1.92
MSH2-203ENST00000454849 KYAT1Q16773 422 aa27.05■■□□□ 1.92
MSH2-203ENST00000454849 CES5AQ6NT32 575 aa27.05■■□□□ 1.92
MSH2-203ENST00000454849 CEP57L1Q8IYX8 460 aa27.05■■□□□ 1.92
MSH2-203ENST00000454849 TSHZ2Q9NRE2 1034 aa27.05■■□□□ 1.92
MSH2-203ENST00000454849 NUB1Q9Y5A7 615 aa27.05■■□□□ 1.92
MSH2-203ENST00000454849 GOLGA8IPA6NC78 632 aa27.04■■□□□ 1.92
MSH2-203ENST00000454849 C19orf67A6NJJ6 358 aa27.04■■□□□ 1.92
MSH2-203ENST00000454849 GOLGA8JA6NMD2 632 aa27.04■■□□□ 1.92
MSH2-203ENST00000454849 TGM5O43548 720 aa27.04■■□□□ 1.92
MSH2-203ENST00000454849 ACTN4O43707 911 aaKnown RBP27.04■■□□□ 1.92
MSH2-203ENST00000454849 NFICP08651 508 aa27.04■■□□□ 1.92
MSH2-203ENST00000454849 FGFR3P22607 806 aa27.04■■□□□ 1.92
MSH2-203ENST00000454849 RPL9P32969 192 aaKnown RBP27.04■■□□□ 1.92
MSH2-203ENST00000454849 CRELD2Q6UXH1 353 aaPredicted RBP27.04■■□□□ 1.92
MSH2-203ENST00000454849 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.04■■□□□ 1.92
MSH2-203ENST00000454849 PIK3R5Q8WYR1 880 aa27.04■■□□□ 1.92
MSH2-203ENST00000454849 FAM213AQ9BRX8 229 aa27.04■■□□□ 1.92
MSH2-203ENST00000454849 PHF7Q9BWX1 381 aaPredicted RBP27.04■■□□□ 1.92
MSH2-203ENST00000454849 POMKQ9H5K3 350 aa27.04■■□□□ 1.92
MSH2-203ENST00000454849 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.04■■□□□ 1.92
MSH2-203ENST00000454849 PPEF2O14830 753 aa27.03■■□□□ 1.92
MSH2-203ENST00000454849 RFPL2O75678 378 aa27.03■■□□□ 1.92
MSH2-203ENST00000454849 PLXNA3P51805 1871 aa27.03■■□□□ 1.92
MSH2-203ENST00000454849 ZBTB6Q15916 424 aa27.03■■□□□ 1.92
MSH2-203ENST00000454849 RSPO2Q6UXX9 243 aaPredicted RBP27.03■■□□□ 1.92
MSH2-203ENST00000454849 PAGE5Q96GU1 130 aa27.03■■□□□ 1.92
MSH2-203ENST00000454849 CBWD1Q9BRT8 395 aa27.03■■□□□ 1.92
MSH2-203ENST00000454849 FNIP2Q9P278 1114 aa27.03■■□□□ 1.92
MSH2-203ENST00000454849 TCHHQ07283 1943 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 TRAPPC3O43617 180 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 SLFN14P0C7P3 912 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 MCM4P33991 863 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 HOXD13P35453 343 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 NDUFA8P51970 172 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 ITIH3Q06033 890 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 SCAND2PQ9GZW5 306 aaPredicted RBP27.02■■□□□ 1.92
MSH2-203ENST00000454849 SFXN1Q9H9B4 322 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 MAGEF1Q9HAY2 307 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 VWA8A3KMH1 1905 aa27.02■■□□□ 1.92
MSH2-203ENST00000454849 OR1D2P34982 312 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 WNT7BP56706 349 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 POSTNQ15063 836 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 FAM26FQ5R3K3 315 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 CNNM4Q6P4Q7 775 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 UNC13DQ70J99 1090 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 NELFCDQ8IXH7 590 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 FSIP1Q8NA03 581 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 FAM84AQ96KN4 292 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 POP1Q99575 1024 aaKnown RBP27.01■■□□□ 1.91
MSH2-203ENST00000454849 GOLPH3LQ9H4A5 285 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 SLC39A2Q9NP94 309 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 UBQLN1Q9UMX0 589 aaKnown RBP27.01■■□□□ 1.91
MSH2-203ENST00000454849 HPSEQ9Y251 543 aa27.01■■□□□ 1.91
MSH2-203ENST00000454849 CCDC195A0A1B0GUA6 201 aa27■■□□□ 1.91
MSH2-203ENST00000454849 ADRB2P07550 413 aa27■■□□□ 1.91
MSH2-203ENST00000454849 ALCAMQ13740 583 aa27■■□□□ 1.91
MSH2-203ENST00000454849 TMEM132DQ14C87 1099 aa27■■□□□ 1.91
MSH2-203ENST00000454849 ATAT1Q5SQI0 421 aa27■■□□□ 1.91
MSH2-203ENST00000454849 LILRA6Q6PI73 481 aa27■■□□□ 1.91
MSH2-203ENST00000454849 KREMEN2Q8NCW0 462 aa27■■□□□ 1.91
MSH2-203ENST00000454849 CDY1Q9Y6F8 540 aa27■■□□□ 1.91
MSH2-203ENST00000454849 LOC730098B7Z3J9 87 aa26.99■■□□□ 1.91
MSH2-203ENST00000454849 SYKP43405 635 aa26.99■■□□□ 1.91
MSH2-203ENST00000454849 ARPP19P56211 112 aa26.99■■□□□ 1.91
MSH2-203ENST00000454849 CREMQ03060 361 aa26.99■■□□□ 1.91
MSH2-203ENST00000454849 VARS2Q5ST30 1063 aaKnown RBP26.99■■□□□ 1.91
MSH2-203ENST00000454849 RNF135Q8IUD6 432 aa26.99■■□□□ 1.91
MSH2-203ENST00000454849 GPR65Q8IYL9 337 aa26.99■■□□□ 1.91
MSH2-203ENST00000454849 RIPOR3Q96MK2 946 aa26.99■■□□□ 1.91
MSH2-203ENST00000454849 TMEM206Q9H813 350 aa26.99■■□□□ 1.91
MSH2-203ENST00000454849 TIMM13Q9Y5L4 95 aaPredicted RBP26.99■■□□□ 1.91
MSH2-203ENST00000454849 PDCD11Q14690 1871 aaKnown RBP26.98■■□□□ 1.91
MSH2-203ENST00000454849 LRPAP1P30533 357 aa26.98■■□□□ 1.91
MSH2-203ENST00000454849 MTHFRP42898 656 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms