RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CDH8P55286 799 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 ZNF844Q08AG5 666 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 SEPT7Q16181 437 aaKnown RBP12.75□□□□□ -0.37
SMPD4-213ENST00000454468 C1orf220Q5T0J3 134 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 TDRD10Q5VZ19 366 aaKnown RBP12.75□□□□□ -0.37
SMPD4-213ENST00000454468 CATSPERGQ6ZRH7 1159 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 SLC9A9Q8IVB4 645 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 ZC3H3Q8IXZ2 948 aaKnown RBP12.75□□□□□ -0.37
SMPD4-213ENST00000454468 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 PRELID2Q8N945 189 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.75□□□□□ -0.37
SMPD4-213ENST00000454468 RASGRF2O14827 1237 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 PHF2O75151 1096 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
SMPD4-213ENST00000454468 HSDL1Q3SXM5 330 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 IQCKQ8N0W5 287 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 CALN1Q9BXU9 219 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 WNT8AQ9H1J5 351 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 R3HDMLQ9H3Y0 253 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 PCDHB2Q9Y5E7 798 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 A0A0A6YYK5 440 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-213ENST00000454468 TTLL13PA6NNM8 815 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 SGK1O00141 431 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 TNNC2P02585 160 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 PRKCBP05771 671 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 CHRNA3P32297 505 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 MDH1P40925 334 aaKnown RBP12.75□□□□□ -0.37
SMPD4-213ENST00000454468 WNT7BP56706 349 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 BPIFB4P59827 614 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 ZNF699Q32M78 642 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 TTC31Q49AM3 519 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-213ENST00000454468 C7orf31Q8N865 590 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 LMO3Q8TAP4 145 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 SHC3Q92529 594 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 CCT8L2Q96SF2 557 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 INTS9Q9NV88 658 aaKnown RBP12.75□□□□□ -0.37
SMPD4-213ENST00000454468 GTF3C4Q9UKN8 822 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 SYNPO2Q9UMS6 1093 aa12.75□□□□□ -0.37
SMPD4-213ENST00000454468 CYP2C8P10632 490 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 RFX1P22670 979 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 NCKAP1LP55160 1127 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 NIPA1Q7RTP0 329 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 TMC3Q7Z5M5 1100 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 KCTD17Q8N5Z5 321 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 HELQQ8TDG4 1101 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 MPHOSPH6Q99547 160 aaKnown RBP12.74□□□□□ -0.37
SMPD4-213ENST00000454468 DDX23Q9BUQ8 820 aaKnown RBP12.74□□□□□ -0.37
SMPD4-213ENST00000454468 MTFR1LQ9H019 292 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 BTBD7Q9P203 1132 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 IVNS1ABPQ9Y6Y0 642 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 PFASO15067 1338 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 CDK5RAP2Q96SN8 1893 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 SYNJ2BP-COX16A0A087WUM0 186 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 F5H423 210 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-213ENST00000454468 H0YCG3 227 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 PLA2G6O60733 806 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 CST3P01034 146 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-213ENST00000454468 COILP38432 576 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-213ENST00000454468 PTENP60484 403 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 IFI35P80217 286 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-213ENST00000454468 CUL2Q13617 745 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 SCARA3Q6AZY7 606 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 MICALCLQ6ZW33 695 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 NLRP14Q86W24 1093 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 ERICH1Q86X53 443 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 HSPH1Q92598 858 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 COX16Q9P0S2 106 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 SAE1Q9UBE0 346 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-213ENST00000454468 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-213ENST00000454468 MNAT1P51948 309 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 PPP2R2AP63151 447 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 SLFN12LQ6IEE8 588 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 TTC27Q6P3X3 843 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 EMC1Q8N766 993 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 SPATC1LQ9H0A9 340 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 EFCC1Q9HA90 598 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 NUB1Q9Y5A7 615 aa12.74□□□□□ -0.37
SMPD4-213ENST00000454468 LY75O60449 1722 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 P4HA2O15460 535 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 B4GALT5O43286 388 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 KRT15P19012 456 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
SMPD4-213ENST00000454468 ALDH5A1P51649 535 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-213ENST00000454468 HIRAP54198 1017 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-213ENST00000454468 NEDD9Q14511 834 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 TMEM63BQ5T3F8 832 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 GPAT2Q6NUI2 795 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 DPY19L2P1Q6NXN4 242 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 CCDC33Q8N5R6 958 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 GPRC5DQ9NZD1 345 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 ANKRD31Q8N7Z5 1873 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 MAFGO15525 162 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 ANXA13P27216 316 aa12.73□□□□□ -0.37
SMPD4-213ENST00000454468 RPL7AP62424 266 aaKnown RBP12.73□□□□□ -0.37
SMPD4-213ENST00000454468 HEXIM2Q96MH2 286 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms