RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ENPEPQ07075 957 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 KCNA1Q09470 495 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 CAMK4Q16566 473 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 KLHL40Q2TBA0 621 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 SLC39A4Q6P5W5 647 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 RBM43Q6ZSC3 357 aaKnown RBP9.47□□□□□ -0.89
COL28A1-205ENST00000453441 CDR2LQ86X02 465 aaPredicted RBP9.47□□□□□ -0.89
COL28A1-205ENST00000453441 THNSL1Q8IYQ7 743 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 ADSSL1Q8N142 457 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 GPD1LQ8N335 351 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 ZNF511Q8NB15 262 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 XXYLT1Q8NBI6 393 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 GLIS3Q8NEA6 775 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 LPPQ93052 612 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 ZBTB45Q96K62 511 aaPredicted RBP9.47□□□□□ -0.89
COL28A1-205ENST00000453441 SNX27Q96L92 541 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 FBXL18Q96ME1 805 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 UROC1Q96N76 676 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 GAD1Q99259 594 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 APOL6Q9BWW8 343 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 KCTD10Q9H3F6 313 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 CNTN3Q9P232 1028 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 CPSF3Q9UKF6 684 aaKnown RBP9.47□□□□□ -0.89
COL28A1-205ENST00000453441 GDAQ9Y2T3 454 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 PCDHB12Q9Y5F1 795 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 TTC26A0AVF1 554 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 ZNF233A6NK53 670 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 GRXCR1A8MXD5 290 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 C5orf67F2Z3F1 127 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 MAPK13O15264 365 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 THP07101 528 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 HARSP12081 509 aaKnown RBP9.46□□□□□ -0.9
COL28A1-205ENST00000453441 CYP3A5P20815 502 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 IBSPP21815 317 aaPredicted RBP9.46□□□□□ -0.9
COL28A1-205ENST00000453441 AKAP5P24588 427 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 ADSSP30520 456 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 ALDH7A1P49419 539 aaKnown RBP9.46□□□□□ -0.9
COL28A1-205ENST00000453441 RABGGTBP53611 331 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 ERVK-21P61565 698 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 TAP1Q03518 808 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 UBE3AQ05086 875 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 CENPPQ6IPU0 288 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 ALKAL1Q6UXT8 129 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 TMCO2Q7Z6W1 182 aaPredicted RBP9.46□□□□□ -0.9
COL28A1-205ENST00000453441 BRSK2Q8IWQ3 736 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 NELFCDQ8IXH7 590 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 EHBP1Q8NDI1 1231 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 P2RX5Q93086 422 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 ZNF558Q96NG5 402 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 C11orf84Q9BUA3 381 aaPredicted RBP9.46□□□□□ -0.9
COL28A1-205ENST00000453441 NKX2-4Q9H2Z4 354 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 TBC1D13Q9NVG8 400 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 HSPBP1Q9NZL4 362 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 INPP5FQ9Y2H2 1132 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 USP20Q9Y2K6 914 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 YBX2Q9Y2T7 364 aaKnown RBP9.46□□□□□ -0.9
COL28A1-205ENST00000453441 C2CD2Q9Y426 696 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 HES2Q9Y543 173 aa9.46□□□□□ -0.9
COL28A1-205ENST00000453441 MRPL42Q9Y6G3 142 aaKnown RBP9.46□□□□□ -0.9
COL28A1-205ENST00000453441 PDCD11Q14690 1871 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 NLRC5Q86WI3 1866 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 CETN3O15182 167 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 EXOC3O60645 756 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 FGFR1OPO95684 399 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 NR3C1P04150 777 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 CCNE1P24864 410 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 RPL9P32969 192 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 BMPR1AP36894 532 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 PRCPP42785 496 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 SCNN1GP51170 649 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 AP3M2P53677 418 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 OSTNP61366 133 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 FKBP3Q00688 224 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 DSC1Q08554 894 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 PAK1Q13153 545 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 TUSC3Q13454 348 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 ENOX2Q16206 610 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 SNRNP35Q16560 246 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 SLC10A6Q3KNW5 377 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 PAN2Q504Q3 1202 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 ZCWPW2Q504Y3 356 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 SPOUT1Q5T280 376 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 SASS6Q6UVJ0 657 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 TMEM192Q8IY95 271 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 CEP120Q8N960 986 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 GSTCDQ8NEC7 633 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 CACTINQ8WUQ7 758 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 PPP1R10Q96QC0 940 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 CBWD1Q9BRT8 395 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 FAM213AQ9BRX8 229 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 MKNK1Q9BUB5 465 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 HAPLN2Q9GZV7 340 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 LMAN2LQ9H0V9 348 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 ZNF576Q9H609 170 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 CWH43Q9H720 699 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 DMAC2Q9NW81 257 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 RBAKQ9NYW8 714 aaPredicted RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 UBQLN1Q9UMX0 589 aaKnown RBP9.45□□□□□ -0.9
COL28A1-205ENST00000453441 LZTS1Q9Y250 596 aa9.45□□□□□ -0.9
COL28A1-205ENST00000453441 FRMD4BQ9Y2L6 1034 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms