RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ANKFY1Q9P2R3 1169 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 DERAQ9Y315 318 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 DOCK8Q8NF50 2099 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 CLUHO75153 1309 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 MUC6Q6W4X9 2439 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 A0A0B4J269 797 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 K7ENM7 598 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 PPP6R2O75170 966 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 WEE2P0C1S8 567 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 MARCKSP29966 332 aaPredicted RBP17.47■□□□□ 0.39
SGCE-208ENST00000450385 LRPAP1P30533 357 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 TDGQ13569 410 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 ALCAMQ13740 583 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 MRPL58Q14197 206 aaKnown RBP17.47■□□□□ 0.39
SGCE-208ENST00000450385 DHX8Q14562 1220 aaKnown RBP17.47■□□□□ 0.39
SGCE-208ENST00000450385 ZBTB6Q15916 424 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 SLC8B1Q6J4K2 584 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 KANK3Q6NY19 840 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 ZNF720Q7Z2F6 126 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 MAP4K3Q8IVH8 894 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 ZNF461Q8TAF7 563 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 SUSD3Q96L08 255 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 CACNG4Q9UBN1 327 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 UBQLN1Q9UMX0 589 aaKnown RBP17.47■□□□□ 0.39
SGCE-208ENST00000450385 NUB1Q9Y5A7 615 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 STYXL1Q9Y6J8 313 aa17.47■□□□□ 0.39
SGCE-208ENST00000450385 ZDBF2Q9HCK1 2354 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 ARHGEF37A1IGU5 675 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 RFPL2O75678 378 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 OR1D2P34982 312 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 PPP2R3AQ06190 1150 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 PPM1LQ5SGD2 360 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 TPGS2Q68CL5 300 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 HSCBQ8IWL3 235 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 FIZ1Q96SL8 496 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 CUEDC2Q9H467 287 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 RPF1Q9H9Y2 349 aaKnown RBP17.46■□□□□ 0.39
SGCE-208ENST00000450385 CDH22Q9UJ99 828 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 EXOC7Q9UPT5 735 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 PCDHB13Q9Y5F0 798 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 MYH15Q9Y2K3 1946 aa17.46■□□□□ 0.39
SGCE-208ENST00000450385 FAM189A1O60320 539 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 TBC1D4O60343 1298 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 ABLIM3O94929 683 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 YEATS4O95619 227 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 SPATA31D3P0C874 917 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 RPL17P18621 184 aaKnown RBP17.45■□□□□ 0.38
SGCE-208ENST00000450385 SOX4Q06945 474 aaPredicted RBP17.45■□□□□ 0.38
SGCE-208ENST00000450385 AXDND1Q5T1B0 1012 aaPredicted RBP17.45■□□□□ 0.38
SGCE-208ENST00000450385 SPATA31D4Q6ZUB0 917 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 LINC00301Q8NCQ3 95 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 LRRC15Q8TF66 581 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 DDX12PQ92771 950 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 ASB7Q9H672 318 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 KCNK12Q9HB15 430 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 AVENQ9NQS1 362 aaPredicted RBP17.45■□□□□ 0.38
SGCE-208ENST00000450385 OLFML3Q9NRN5 406 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 KCNH3Q9ULD8 1083 aa17.45■□□□□ 0.38
SGCE-208ENST00000450385 M0QZQ0 153 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 C8AP07357 584 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 HARSP12081 509 aaKnown RBP17.44■□□□□ 0.38
SGCE-208ENST00000450385 SP100P23497 879 aaPredicted RBP17.44■□□□□ 0.38
SGCE-208ENST00000450385 TKTP29401 623 aaKnown RBP17.44■□□□□ 0.38
SGCE-208ENST00000450385 ELF1P32519 619 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 AMPD3Q01432 767 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
SGCE-208ENST00000450385 STK38Q15208 465 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 VARS2Q5ST30 1063 aaKnown RBP17.44■□□□□ 0.38
SGCE-208ENST00000450385 USP49Q70CQ1 688 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 NT5DC4Q86YG4 428 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 GLYCTKQ8IVS8 523 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 C3orf58Q8NDZ4 430 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 MSTO1Q9BUK6 570 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 STRA6Q9BX79 667 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 ZHX3Q9H4I2 956 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 GOLGA2P5Q9HBQ8 144 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 CPSF3Q9UKF6 684 aaKnown RBP17.44■□□□□ 0.38
SGCE-208ENST00000450385 PCDHB8Q9UN66 801 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 CDY1Q9Y6F8 540 aa17.44■□□□□ 0.38
SGCE-208ENST00000450385 SPTLC2O15270 562 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 OAZ2O95190 189 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 LDHAP00338 332 aaKnown RBP17.43■□□□□ 0.38
SGCE-208ENST00000450385 HSP90AA1P07900 732 aaKnown RBP17.43■□□□□ 0.38
SGCE-208ENST00000450385 CXCL8P10145 99 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 LAMP2P13473 410 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 ATF2P15336 505 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 GBP2P32456 591 aaPredicted RBP17.43■□□□□ 0.38
SGCE-208ENST00000450385 STAT6P42226 847 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 AARSP49588 968 aaKnown RBP eCLIP17.43■□□□□ 0.38
SGCE-208ENST00000450385 CLCN5P51795 746 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 ENOX2Q16206 610 aaKnown RBP17.43■□□□□ 0.38
SGCE-208ENST00000450385 SPATA1Q5VX52 437 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 TCEAL8Q8IYN2 117 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 BEST2Q8NFU1 509 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 C18orf25Q96B23 403 aaPredicted RBP17.43■□□□□ 0.38
SGCE-208ENST00000450385 DNAJC19Q96DA6 116 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 KIF12Q96FN5 646 aa17.43■□□□□ 0.38
SGCE-208ENST00000450385 CLIC6Q96NY7 704 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms