RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 DEUP1Q05D60 604 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 FOXD4Q12950 439 aaPredicted RBP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 EFTUD2Q15029 972 aaKnown RBP eCLIP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 TSR3Q9UJK0 312 aaKnown RBP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 SCAF8Q9UPN6 1271 aaKnown RBP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 CCDC195A0A1B0GUA6 201 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 E2F6O75461 281 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 NPTXRO95502 500 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 HIF1AQ16665 826 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 IL31Q6EBC2 164 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 INTS5Q6P9B9 1019 aaKnown RBP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 LCA5Q86VQ0 697 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 SPATA17Q96L03 361 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 RMDN2Q96LZ7 410 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 POLR3CQ9BUI4 534 aaPredicted RBP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 ITM2BQ9Y287 266 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 PITPNM2Q9BZ72 1349 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 PRPF4O43172 522 aaKnown RBP eCLIP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 HLA-DRAP01903 254 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 SRGNP10124 158 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 SLC18A3Q16572 532 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 ERO1BQ86YB8 467 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 PGBD3Q8N328 593 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 SLC30A5Q8TAD4 765 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 SLC26A7Q8TE54 656 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 BTBD6Q96KE9 485 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 SLC13A1Q9BZW2 595 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 CATSPERBQ9H7T0 1116 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 AIPL1Q9NZN9 384 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 GYG2O15488 501 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 MAP4P27816 1152 aaKnown RBP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 GCLCP48506 637 aaPredicted RBP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 MAGOHP61326 146 aaKnown RBP10.74□□□□□ -0.69
SCN10A-201ENST00000449082 P3H1Q32P28 736 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 SYTL3Q4VX76 610 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 PLEKHH3Q7Z736 793 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 C17orf75Q9HAS0 396 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 CASS4Q9NQ75 786 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 ZFATQ9P243 1243 aa10.74□□□□□ -0.69
SCN10A-201ENST00000449082 CFAP69A5D8W1 941 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 UBE2Q2LH0YL09 131 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 P4HA2O15460 535 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ARHGAP15Q53QZ3 475 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 TEDDM1Q5T9Z0 273 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 FAM47EQ6ZV65 393 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ANKS3Q6ZW76 656 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ARHGAP18Q8N392 663 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ZKSCAN4Q969J2 545 aaPredicted RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 MKNK1Q9BUB5 465 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ZFP69BQ9UJL9 534 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 LMNAP02545 664 aaKnown RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 IRF1P10914 325 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 UCHL3P15374 230 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 MMS22LQ6ZRQ5 1243 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 TRAPPC11Q7Z392 1133 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 SLC35G2Q8TBE7 412 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 SCFD1Q8WVM8 642 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 THOC1Q96FV9 657 aaKnown RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 FOPNLQ96NB1 174 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ASPSCR1Q9BZE9 553 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 MAD2L2Q9UI95 211 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 INTUQ9ULD6 942 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 SLC4A7Q9Y6M7 1214 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 BRAFP15056 766 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 EFHC1Q5JVL4 640 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 C9orf131Q5VYM1 1079 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 SDE2Q6IQ49 451 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 KRT35Q92764 455 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 MTBPQ96DY7 904 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 MCEEQ96PE7 176 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 COLEC11Q9BWP8 271 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 MTFR1LQ9H019 292 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 PCDHGB4Q9UN71 923 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 RRP15Q9Y3B9 282 aaKnown RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 HNRNPCL2B2RXH8 293 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 HNRNPCL1O60812 293 aaKnown RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 DIAPH2O60879 1101 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 SPAG7O75391 227 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 HIST1H2AGP0C0S8 130 aaPredicted RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 HIST1H2ADP20671 130 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 GNL1P36915 607 aaPredicted RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 RFX5P48382 616 aaPredicted RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 TAF6P49848 677 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ANTXR2P58335 489 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 NCAPHQ15003 741 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 ZC2HC1CQ53FD0 456 aaPredicted RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 KDELC2Q7Z4H8 507 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 COL23A1Q86Y22 540 aaPredicted RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 HIST1H2AHQ96KK5 128 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 HIST1H2AJQ99878 128 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 H2AFJQ9BTM1 129 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 MROH8Q9H579 483 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 COG4Q9H9E3 785 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 PCDHB2Q9Y5E7 798 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.73□□□□□ -0.69
SCN10A-201ENST00000449082 SSU72P8A0A1W2PR75 194 aa10.73□□□□□ -0.69
SCN10A-201ENST00000449082 NLRP11P59045 1033 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms