RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	RHBDF2	Q6PJF5	856 aa		18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	SYDE1	Q6ZW31	735 aa	Predicted RBP	18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	TRMT10C	Q7L0Y3	403 aa	Known RBP	18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	SEC16B	Q96JE7	1060 aa		18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	FNBP1	Q96RU3	617 aa		18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	TEX13B	Q9BXU2	312 aa		18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	HAPLN2	Q9GZV7	340 aa		18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	MAF1	Q9H063	256 aa		18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	ACAD9	Q9H845	621 aa		18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	EFCC1	Q9HA90	598 aa		18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	PICK1	Q9NRD5	415 aa		18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	AGO2	Q9UKV8	859 aa	Known RBP	18.07	■□□□□ 0.48
TOM1-210	ENST00000449058	CHN1	P15882	459 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	TNNI1	P19237	187 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	ATP4A	P20648	1035 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	GMPS	P49915	693 aa	Predicted RBP	18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	DRP2	Q13474	957 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	EPS8L3	Q8TE67	593 aa	Known RBP	18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	HERPUD2	Q9BSE4	406 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	AAAS	Q9NRG9	546 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	CHST7	Q9NS84	486 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	UMODL1	Q5DID0	1318 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	NFKBIE	O00221	500 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	IVD	P26440	423 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	MAN1A1	P33908	653 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	PIK3CA	P42336	1068 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	NSF	P46459	744 aa	Known RBP	18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	SP2	Q02086	613 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	STRN3	Q13033	797 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	PTK6	Q13882	451 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	MFSD5	Q6N075	450 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	CNPY4	Q8N129	248 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	SLC16A10	Q8TF71	515 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	CHMP6	Q96FZ7	201 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	WRNIP1	Q96S55	665 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	PORCN	Q9H237	461 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	MAFB	Q9Y5Q3	323 aa	Predicted RBP	18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	CAPN7	Q9Y6W3	813 aa		18.06	■□□□□ 0.48
TOM1-210	ENST00000449058	C19orf81	C9J6K1	198 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	PROSC	O94903	275 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	ATG7	O95352	703 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	ITIH2	P19823	946 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	ACOT2	P49753	483 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	POLG	P54098	1239 aa	Predicted RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	TGFB2	P61812	414 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	AUH	Q13825	339 aa	Known RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	LLGL1	Q15334	1064 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	RNF187	Q5TA31	235 aa	Predicted RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	LLGL2	Q6P1M3	1020 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.05	■□□□□ 0.48	1e-6	■■■■■ 64.3
TOM1-210	ENST00000449058	ASAP3	Q8TDY4	903 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	ZNF317	Q96PQ6	595 aa	Predicted RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	ROPN1B	Q9BZX4	212 aa	Predicted RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	DCLK3	Q9C098	648 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	STMN4	Q9H169	189 aa	Predicted RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	DHX33	Q9H6R0	707 aa	Known RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	ROPN1	Q9HAT0	212 aa	Predicted RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	SMIM23	A6NLE4	172 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	RASGRF2	O14827	1237 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	SORBS3	O60504	671 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	NAMPT	P43490	491 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	SNX1	Q13596	522 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	CUL2	Q13617	745 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	DALRD3	Q5D0E6	543 aa	Known RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	SPOPL	Q6IQ16	392 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	TRIM72	Q6ZMU5	477 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	CATSPERG	Q6ZRH7	1159 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	UHMK1	Q8TAS1	419 aa	Known RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	ZNF526	Q8TF50	670 aa	Predicted RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	TMEM143	Q96AN5	459 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	APOBEC3G	Q9HC16	384 aa	Known RBP	18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	CNTN6	Q9UQ52	1028 aa		18.05	■□□□□ 0.48
TOM1-210	ENST00000449058	ZNF541	Q9H0D2	1346 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	GLRA2	P23416	452 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	ARL2	P36404	184 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	NOMO3	P69849	1222 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	ACTN3	Q08043	901 aa	Predicted RBP	18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	GKAP1	Q5VSY0	366 aa	Predicted RBP	18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	SLFN12L	Q6IEE8	588 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	CACNA2D3	Q8IZS8	1091 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	ATG4A	Q8WYN0	398 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	SNF8	Q96H20	258 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	VCPIP1	Q96JH7	1222 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	CEP89	Q96ST8	783 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	CDC42EP4	Q9H3Q1	356 aa	Known RBP	18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	OAT	P04181	439 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	ICAM3	P32942	547 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	KLF1	Q13351	362 aa	Predicted RBP	18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	C2CD6	Q53TS8	623 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	CPLX4	Q7Z7G2	160 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	PHLDB2	Q86SQ0	1253 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	ABRA	Q8N0Z2	381 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	GRK7	Q8WTQ7	553 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	ZBTB45	Q96K62	511 aa	Predicted RBP	18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	CABS1	Q96KC9	395 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	SELENOS	Q9BQE4	189 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	CCDC134	Q9H6E4	229 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	ZNF302	Q9NR11	478 aa		18.04	■□□□□ 0.48

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