RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 PON1P27169 355 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 SCNN1GP51170 649 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 GRIK3Q13003 919 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 BIRC3Q13489 604 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 DPY19L2P1Q6NXN4 242 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 EHBP1Q8NDI1 1231 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 BEST2Q8NFU1 509 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 HELQQ8TDG4 1101 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 RSPH1Q8WYR4 309 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 C18orf25Q96B23 403 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-203ENST00000449049 CRACR2AQ9BSW2 395 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 RRAGDQ9NQL2 400 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-203ENST00000449049 SLC38A7Q9NVC3 462 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 RAB20Q9NX57 234 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 DPP3Q9NY33 737 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 ITGA11Q9UKX5 1188 aa15.17■□□□□ 0.02
SHMT2-203ENST00000449049 HLA-DRAP01903 254 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 AMHP03971 560 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 THP07101 528 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 SLC9A1P19634 815 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 KLK7P49862 253 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 TMEM240Q5SV17 173 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 SPECC1LQ69YQ0 1117 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 TRIM65Q6PJ69 517 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 ZNF365Q70YC5 407 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 ANP32BQ92688 251 aaKnown RBP15.16■□□□□ 0.02
SHMT2-203ENST00000449049 INTS2Q9H0H0 1204 aaKnown RBP15.16■□□□□ 0.02
SHMT2-203ENST00000449049 SIX4Q9UIU6 781 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 NR2E3Q9Y5X4 410 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 COL4A6Q14031 1691 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 TDRD15B5MCY1 1934 aaKnown RBP15.16■□□□□ 0.02
SHMT2-203ENST00000449049 PTPRSQ13332 1948 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 PHACTR2O75167 634 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 PIK3CAP42336 1068 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 SOX4Q06945 474 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-203ENST00000449049 NCOA4Q13772 614 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 NOMO2Q5JPE7 1267 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 SCARA3Q6AZY7 606 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 OTOP2Q7RTS6 562 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 TOP1MTQ969P6 601 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 LBHD1Q9BQE6 289 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-203ENST00000449049 SIX2Q9NPC8 291 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 PLCB1Q9NQ66 1216 aa15.16■□□□□ 0.02
SHMT2-203ENST00000449049 ZC3H11AO75152 810 aaKnown RBP eCLIP15.15■□□□□ 0.02
SHMT2-203ENST00000449049 CST3P01034 146 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-203ENST00000449049 ITGB3P05106 788 aa15.15■□□□□ 0.02
SHMT2-203ENST00000449049 LRPAP1P30533 357 aa15.15■□□□□ 0.02
SHMT2-203ENST00000449049 GUCY2FP51841 1108 aa15.15■□□□□ 0.02
SHMT2-203ENST00000449049 DEFB103AP81534 67 aa15.15■□□□□ 0.02
SHMT2-203ENST00000449049 TMEM130Q8N3G9 435 aa15.15■□□□□ 0.02
SHMT2-203ENST00000449049 URGCPQ8TCY9 931 aa15.15■□□□□ 0.02
SHMT2-203ENST00000449049 CASD1Q96PB1 797 aa15.15■□□□□ 0.02
SHMT2-203ENST00000449049 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.027e-8■■□□□ 13.7
SHMT2-203ENST00000449049 LSM14BQ9BX40 385 aaKnown RBP15.15■□□□□ 0.02
SHMT2-203ENST00000449049 KANSL3Q9P2N6 904 aa15.15■□□□□ 0.02
SHMT2-203ENST00000449049 INPP5FQ9Y2H2 1132 aa15.15■□□□□ 0.02
SHMT2-203ENST00000449049 LRRN2O75325 713 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 POMCP01189 267 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 FIGNQ5HY92 759 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 HERVK_113Q902F9 699 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 PDLIM2Q96JY6 352 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 PCMTD1Q96MG8 357 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-203ENST00000449049 FNDC1Q4ZHG4 1894 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-203ENST00000449049 ANO9A1A5B4 782 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 DGKIO75912 1065 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 NOL4O94818 638 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 ASS1P00966 412 aaKnown RBP15.14■□□□□ 0.01
SHMT2-203ENST00000449049 POLR2BP30876 1174 aaKnown RBP15.14■□□□□ 0.01
SHMT2-203ENST00000449049 KCNJ6P48051 423 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 RBP5P82980 135 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 TRPC3Q13507 836 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 C9orf57Q5W0N0 161 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 TMC6Q7Z403 805 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 ABI1Q8IZP0 508 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 NUP58Q9BVL2 599 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 TTYH3Q9C0H2 523 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 XYLT2Q9H1B5 865 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 GANQ9H2C0 597 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 TBC1D13Q9NVG8 400 aa15.14■□□□□ 0.01
SHMT2-203ENST00000449049 PIRO00625 290 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 EPHB6O15197 1021 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 STAU1O95793 577 aaKnown RBP15.13■□□□□ 0.01
SHMT2-203ENST00000449049 KRT19P08727 400 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 ATICP31939 592 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 GATMP50440 423 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 MYL6P60660 151 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 APBA1Q02410 837 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 DSC1Q08554 894 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 TBX2Q13207 712 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-203ENST00000449049 TUSC3Q13454 348 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 SGSM1Q2NKQ1 1148 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 KLHDC7AQ5VTJ3 777 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 LRRC52Q8N7C0 313 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 NEK11Q8NG66 645 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 TAF4BQ92750 862 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 IQCDQ96DY2 449 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 VRTNQ9H8Y1 702 aa15.13■□□□□ 0.01
SHMT2-203ENST00000449049 RC3H2Q9HBD1 1191 aaKnown RBP15.13■□□□□ 0.01
SHMT2-203ENST00000449049 GOLGA2P5Q9HBQ8 144 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms