RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ABHD14A-ACY1A0A1B0GW23 586 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 TDRD15B5MCY1 1934 aaKnown RBP21.06■□□□□ 0.96
SGCE-207ENST00000447873 PTGESO14684 152 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 ITGB3P05106 788 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 ACRP10323 421 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 FPGSQ05932 587 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 PPIGQ13427 754 aaKnown RBP eCLIP21.06■□□□□ 0.96
SGCE-207ENST00000447873 GLB1LQ6UWU2 654 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 C1orf127Q8N9H9 656 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 CCDC150Q8NCX0 1101 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 GSTCDQ8NEC7 633 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 CPLX3Q8WVH0 158 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 C18orf25Q96B23 403 aaPredicted RBP21.06■□□□□ 0.96
SGCE-207ENST00000447873 IQCDQ96DY2 449 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 SLC38A7Q9NVC3 462 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 ITGA11Q9UKX5 1188 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 INPP5FQ9Y2H2 1132 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 LTBP2Q14767 1821 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 LRRN2O75325 713 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 OFD1O75665 1012 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 CLSTN1O94985 981 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 CST3P01034 146 aaPredicted RBP21.05■□□□□ 0.96
SGCE-207ENST00000447873 GYPCP04921 128 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 THP07101 528 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 SCNN1GP51170 649 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 AFF1P51825 1210 aaKnown RBP21.05■□□□□ 0.96
SGCE-207ENST00000447873 GUCY2FP51841 1108 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 APBA1Q02410 837 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 TBX2Q13207 712 aaPredicted RBP21.05■□□□□ 0.96
SGCE-207ENST00000447873 FIGNQ5HY92 759 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 WDR44Q5JSH3 913 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 KLHDC7AQ5VTJ3 777 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 PPP1R10Q96QC0 940 aaKnown RBP21.05■□□□□ 0.96
SGCE-207ENST00000447873 IMPG2Q9BZV3 1241 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 SIX2Q9NPC8 291 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.05■□□□□ 0.96
SGCE-207ENST00000447873 APEX2Q9UBZ4 518 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 TUBGCP4Q9UGJ1 667 aa21.05■□□□□ 0.96
SGCE-207ENST00000447873 EPHB6O15197 1021 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 EFCAB14O75071 495 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 ZC3H11AO75152 810 aaKnown RBP eCLIP21.04■□□□□ 0.96
SGCE-207ENST00000447873 FGFR1P11362 822 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 SYN1P17600 705 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 CYP3A5P20815 502 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 LRMPQ12912 555 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 HELQQ8TDG4 1101 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 PI4K2AQ9BTU6 479 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 MIOSQ9NXC5 875 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 SIX4Q9UIU6 781 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 PLAGL2Q9UPG8 496 aa21.04■□□□□ 0.96
SGCE-207ENST00000447873 NOL4O94818 638 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 POMCP01189 267 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 PTMAP06454 111 aaKnown RBP21.03■□□□□ 0.96
SGCE-207ENST00000447873 CASP14P31944 242 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 MYL6P60660 151 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 POLR2FP61218 127 aaKnown RBP21.03■□□□□ 0.96
SGCE-207ENST00000447873 RBP5P82980 135 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 SGSM1Q2NKQ1 1148 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 CLLU1OSQ5K130 101 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 SCARA3Q6AZY7 606 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 DPY19L2P1Q6NXN4 242 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.03■□□□□ 0.96
SGCE-207ENST00000447873 CACNA2D4Q7Z3S7 1137 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 NPAS4Q8IUM7 802 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 ABI1Q8IZP0 508 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 URGCPQ8TCY9 931 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 NT5C1BQ96P26 610 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 TTYH3Q9C0H2 523 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 GANQ9H2C0 597 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 AGAP1Q9UPQ3 857 aa21.03■□□□□ 0.96
SGCE-207ENST00000447873 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.03■□□□□ 0.96
SGCE-207ENST00000447873 INPPL1O15357 1258 aa21.02■□□□□ 0.96
SGCE-207ENST00000447873 HOXA2O43364 376 aa21.02■□□□□ 0.96
SGCE-207ENST00000447873 UCHL3P15374 230 aa21.02■□□□□ 0.96
SGCE-207ENST00000447873 POLR2BP30876 1174 aaKnown RBP21.02■□□□□ 0.96
SGCE-207ENST00000447873 PHLDB3Q6NSJ2 640 aa21.02■□□□□ 0.96
SGCE-207ENST00000447873 TMEM130Q8N3G9 435 aa21.02■□□□□ 0.96
SGCE-207ENST00000447873 CEP72Q9P209 647 aa21.02■□□□□ 0.96
SGCE-207ENST00000447873 ZMYND8Q9ULU4 1186 aaPredicted RBP21.02■□□□□ 0.96
SGCE-207ENST00000447873 CAPN11Q9UMQ6 739 aa21.02■□□□□ 0.96
SGCE-207ENST00000447873 LUC7L2Q9Y383 392 aaKnown RBP21.02■□□□□ 0.96
SGCE-207ENST00000447873 A0A1W2PQJ5 194 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 BAIAP3O94812 1187 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 ASS1P00966 412 aaKnown RBP21.02■□□□□ 0.95
SGCE-207ENST00000447873 AMHP03971 560 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 RFX1P22670 979 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 FXR1P51114 621 aaKnown RBP eCLIP21.02■□□□□ 0.95
SGCE-207ENST00000447873 NOP14P78316 857 aaKnown RBP21.02■□□□□ 0.95
SGCE-207ENST00000447873 SOX4Q06945 474 aaPredicted RBP21.02■□□□□ 0.95
SGCE-207ENST00000447873 GRIK3Q13003 919 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 ZNF699Q32M78 642 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 NOMO2Q5JPE7 1267 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 GJB7Q6PEY0 223 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 CCDC186Q7Z3E2 898 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 CRIPAKQ8N1N5 446 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 ZNF397Q8NF99 534 aaPredicted RBP21.02■□□□□ 0.95
SGCE-207ENST00000447873 CXorf38Q8TB03 319 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 EDEM3Q9BZQ6 932 aa21.02■□□□□ 0.95
SGCE-207ENST00000447873 UBE2TQ9NPD8 197 aaPredicted RBP21.02■□□□□ 0.95
SGCE-207ENST00000447873 NLRC4Q9NPP4 1024 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms