RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 GATA6Q92908 595 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 LRRC46Q96FV0 321 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 HHIPL1Q96JK4 782 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 KCNC2Q96PR1 638 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 P2RX7Q99572 595 aaKnown RBP4.38□□□□□ -1.71
PMS1-216ENST00000447734 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 TRIM54Q9BYV2 358 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 PITHD1Q9GZP4 211 aaPredicted RBP4.38□□□□□ -1.71
PMS1-216ENST00000447734 C7orf69Q9H7B7 122 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 NECTIN3Q9NQS3 549 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.38□□□□□ -1.71
PMS1-216ENST00000447734 CALCOCO1Q9P1Z2 691 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 IGSF9Q9P2J2 1179 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 IMPACTQ9P2X3 320 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 STOML1Q9UBI4 398 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 SRP68Q9UHB9 627 aaKnown RBP4.38□□□□□ -1.71
PMS1-216ENST00000447734 FEM1BQ9UK73 627 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 ARHGAP26Q9UNA1 814 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 WASF3Q9UPY6 502 aa4.38□□□□□ -1.71
PMS1-216ENST00000447734 A0A0A6YYJ9 748 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 A0A1W2PPH5 198 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 BICDL2A1A5D9 508 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 TRIM43BA6NCK2 446 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 PGPEP1LA6NFU8 196 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 HMX3A6NHT5 357 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 CLCA1A8K7I4 914 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 B4DLN1 442 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 NFIBO00712 420 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 TOR1BO14657 336 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 GSC2O15499 205 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 ASNA1O43681 348 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 MPIG6BO95866 241 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 CEACAM5P06731 702 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 ITGA2BP08514 1039 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 ITGA5P08648 1049 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 FTH1P19P0C7X4 201 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 MYCLP12524 364 aaPredicted RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 PTGS1P23219 599 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 ECHS1P30084 290 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 ADSLP30566 484 aaPredicted RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 HOXA10P31260 410 aaPredicted RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 ADMP35318 185 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 CARSP49589 748 aaKnown RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 DRG2P55039 364 aaKnown RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 SESN2P58004 480 aaPredicted RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 VAMP2P63027 116 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 TLE1Q04724 770 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 CACNB2Q08289 660 aaPredicted RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 NFIAQ12857 509 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 KIF22Q14807 665 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 TAF11Q15544 211 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 FLYWCH1Q4VC44 716 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 SLC44A4Q53GD3 710 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 FAM26FQ5R3K3 315 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 RRAGBQ5VZM2 374 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 FAM205BPQ63HN1 556 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 BORAQ6PGQ7 559 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 KLHL17Q6TDP4 642 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 ZNF783Q6ZMS7 281 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 ZNF765Q7L2R6 523 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 GET4Q7L5D6 327 aaPredicted RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 MILR1Q7Z6M3 343 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 PPP1R3BQ86XI6 285 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 GATAD2AQ86YP4 633 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 TSPYL6Q8N831 410 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 NKAIN3Q8N8D7 197 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 CCDC150Q8NCX0 1101 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 OTUD7AQ8TE49 926 aaPredicted RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 MAML1Q92585 1016 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 TRIM43Q96BQ3 446 aaPredicted RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 ASIC4Q96FT7 647 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 C7orf26Q96N11 449 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 DBNDD2Q9BQY9 259 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 KATNAL1Q9BW62 490 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 MAGEB5Q9BZ81 275 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 ADAM7Q9H2U9 754 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 PREBQ9HCU5 417 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 SEPSECSQ9HD40 501 aaKnown RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 SEMA3GQ9NS98 782 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 SRRDQ9UH36 339 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 PALD1Q9ULE6 856 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 MAGED1Q9Y5V3 778 aaPredicted RBP4.37□□□□□ -1.71
PMS1-216ENST00000447734 TAF6LQ9Y6J9 622 aa4.37□□□□□ -1.71
PMS1-216ENST00000447734 TSPY2A6NKD2 308 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 FAM170BA6NMN3 283 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 DHX15O43143 795 aaKnown RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 SGSM2O43147 1006 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 DAPK3O43293 454 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 AHCYL1O43865 530 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 TMEM127O75204 238 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 SEC24DO94855 1032 aaPredicted RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 RTN3O95197 1032 aaPredicted RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 ESR1P03372 595 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 TSPY3P0CV98 308 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 TSPY8P0CW00 308 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 ZSCAN22P10073 491 aaPredicted RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 APEX1P27695 318 aaKnown RBP4.36□□□□□ -1.71
PMS1-216ENST00000447734 GALNSP34059 522 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 NPTX2P47972 431 aa4.36□□□□□ -1.71
PMS1-216ENST00000447734 KCNJ5P48544 419 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms