RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 DCUN1D1Q96GG9 259 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 MUC3BQ9H195 1237 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 RASA4BC9J798 803 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 RASA4O43374 803 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 ODC1P11926 461 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 DSG3P32926 999 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 ARHGAP15Q53QZ3 475 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 RPLP2P05387 115 aaKnown RBP18.8■□□□□ 0.6
ATG9A-215ENST00000446716 FAM200BP0CF97 657 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 IL25Q9H293 177 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 Q9H521 79 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 FAN1Q9Y2M0 1017 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 SALL1Q9NSC2 1324 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 COPS2P61201 443 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 SMAD1Q15797 465 aaKnown RBP18.8■□□□□ 0.6
ATG9A-215ENST00000446716 KIF19Q2TAC6 998 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 ATPAF2Q8N5M1 289 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 PDCD2LQ9BRP1 358 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 ABCB6Q9NP58 842 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 KLHL11Q9NVR0 708 aa18.8■□□□□ 0.6
ATG9A-215ENST00000446716 OGTO15294 1046 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 NR1D1P20393 614 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 YY1P25490 414 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 SLC26A2P50443 739 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 ADGRA1Q86SQ6 560 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 WDR75Q8IWA0 830 aaKnown RBP18.79■□□□□ 0.6
ATG9A-215ENST00000446716 CCNYL1Q8N7R7 359 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 SYTL5Q8TDW5 730 aaPredicted RBP18.79■□□□□ 0.6
ATG9A-215ENST00000446716 MCEEQ96PE7 176 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 PXMP2Q9NR77 195 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 CTDNEP1O95476 244 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 HP1BP3Q5SSJ5 553 aaPredicted RBP18.79■□□□□ 0.6
ATG9A-215ENST00000446716 DACT2Q5SW24 774 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 USP50Q70EL3 339 aaPredicted RBP18.79■□□□□ 0.6
ATG9A-215ENST00000446716 SLC7A14Q8TBB6 771 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 YME1L1Q96TA2 773 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 TSR3Q9UJK0 312 aaKnown RBP18.79■□□□□ 0.6
ATG9A-215ENST00000446716 C3orf70A6NLC5 250 aaPredicted RBP18.79■□□□□ 0.6
ATG9A-215ENST00000446716 NKRFO15226 690 aaKnown RBP eCLIP18.79■□□□□ 0.6
ATG9A-215ENST00000446716 STRNO43815 780 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 FMR1Q06787 632 aaKnown RBP eCLIP18.79■□□□□ 0.6
ATG9A-215ENST00000446716 CASP8Q14790 479 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 IMPG1Q17R60 797 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 PAN2Q504Q3 1202 aaKnown RBP18.79■□□□□ 0.6
ATG9A-215ENST00000446716 FBXO41Q8TF61 875 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 SPDL1Q96EA4 605 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 GTSE1Q9NYZ3 720 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 KPNA6O60684 536 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 IFT88Q13099 833 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 SPARCL1Q14515 664 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 SLC18A3Q16572 532 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 ANO4Q32M45 955 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 ZBED8Q8IZ13 594 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 KIF2CQ99661 725 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 GPRC5CQ9NQ84 441 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 PLAAQ9Y263 795 aa18.79■□□□□ 0.6
ATG9A-215ENST00000446716 CFLARO15519 480 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 HARS2P49590 506 aaKnown RBP18.78■□□□□ 0.6
ATG9A-215ENST00000446716 DCAF6Q58WW2 860 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 C10orf120Q5SQS8 335 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 CHSY1Q86X52 802 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 PI4K2AQ9BTU6 479 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 FHOD1Q9Y613 1164 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 P4HA2O15460 535 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 GPAT2Q6NUI2 795 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 DNERQ8NFT8 737 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 DPP3Q9NY33 737 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 GRID2IPA4D2P6 1211 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 SLC9A1P19634 815 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 GALCP54803 685 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 GOLGA7BQ2TAP0 167 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 IZUMO3Q5VZ72 239 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 PCNX4Q63HM2 1172 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 METTL7BQ6UX53 244 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 UBA3Q8TBC4 463 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 RNPC3Q96LT9 517 aaKnown RBP18.78■□□□□ 0.6
ATG9A-215ENST00000446716 EFHD1Q9BUP0 239 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 H3BRB1 525 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 EEF2KO00418 725 aaKnown RBP18.78■□□□□ 0.6
ATG9A-215ENST00000446716 HOXA10P31260 410 aaPredicted RBP18.78■□□□□ 0.6
ATG9A-215ENST00000446716 NAMPTP43490 491 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 ARSEP51690 589 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 RASSF3Q86WH2 238 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 RCOR2Q8IZ40 523 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 ATP11CQ8NB49 1132 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 RUSC1Q9BVN2 902 aa18.78■□□□□ 0.6
ATG9A-215ENST00000446716 TUT1Q9H6E5 874 aaKnown RBP18.78■□□□□ 0.6
ATG9A-215ENST00000446716 FAM187AA6NFU0 413 aa18.77■□□□□ 0.6
ATG9A-215ENST00000446716 KCNN4O15554 427 aa18.77■□□□□ 0.6
ATG9A-215ENST00000446716 TMCC1O94876 653 aa18.77■□□□□ 0.6
ATG9A-215ENST00000446716 VTNP04004 478 aa18.77■□□□□ 0.6
ATG9A-215ENST00000446716 SHMT1P34896 483 aa18.77■□□□□ 0.6
ATG9A-215ENST00000446716 NR1H3Q13133 447 aa18.77■□□□□ 0.6
ATG9A-215ENST00000446716 PIGHQ14442 188 aaPredicted RBP18.77■□□□□ 0.6
ATG9A-215ENST00000446716 EFHC1Q5JVL4 640 aa18.77■□□□□ 0.6
ATG9A-215ENST00000446716 CDCA5Q96FF9 252 aa18.77■□□□□ 0.6
ATG9A-215ENST00000446716 AGAP3Q96P47 875 aa18.77■□□□□ 0.6
ATG9A-215ENST00000446716 HMGB1P1B2RPK0 211 aaPredicted RBP18.77■□□□□ 0.6
ATG9A-215ENST00000446716 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.77■□□□□ 0.6
ATG9A-215ENST00000446716 SEZ6Q53EL9 994 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms