RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SLFN12LQ6IEE8 588 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 GPAT2Q6NUI2 795 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 ARMC9Q7Z3E5 817 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 RASGEF1CQ8N431 466 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 SBF1O95248 1867 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 GOLGA6L10A0A0M3HER8 536 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 ZBTB42B2RXF5 422 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 HNRNPH2P55795 449 aaKnown RBP17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 GCNT1Q02742 428 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 TTMPQ5BVD1 217 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 SEL1L2Q5TEA6 688 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 C15orf39Q6ZRI6 1047 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 MMS22LQ6ZRQ5 1243 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 ARMCX2Q7L311 632 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 ZBTB8OSQ8IWT0 167 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 CCDC26Q8TAB7 109 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 HEMGNQ9BXL5 484 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 MRPL4Q9BYD3 311 aaKnown RBP17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 CARD9Q9H257 536 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 RNF19AQ9NV58 838 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 GTF3C4Q9UKN8 822 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 UTP11Q9Y3A2 253 aaKnown RBP17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 EVPLQ92817 2033 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 MSCO60682 206 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 SLC25A27O95847 323 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 VTNP04004 478 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 GZMAP12544 262 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 CEP85LQ5SZL2 805 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 FAM76AQ8TAV0 307 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 ATP8B4Q8TF62 1192 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 C1orf54Q8WWF1 131 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 EXOC4Q96A65 974 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 IMPG2Q9BZV3 1241 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 PLAAQ9Y263 795 aa17.97■□□□□ 0.47
LAPTM4B-201ENST00000445593 ECHS1P30084 290 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 GTF2H1P32780 548 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 ADCYAP1R1P41586 468 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 RAP1GAPP47736 663 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 PLTPP55058 493 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 TMEM174Q8WUU8 243 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 ATG4AQ8WYN0 398 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 KIAA1586Q9HCI6 787 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 CALCOCO1Q9P1Z2 691 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 CNTNAP2Q9UHC6 1331 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 CCDC188H7C350 402 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 TRIM66O15016 1216 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 TGFB3P10600 412 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 TMEM62Q0P6H9 643 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 TRIP13Q15645 432 aaPredicted RBP17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 FOXR1Q6PIV2 292 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 CCDC50Q8IVM0 306 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 CPB2Q96IY4 423 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 MPHOSPH6Q99547 160 aaKnown RBP17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 CGRRF1Q99675 332 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 AKT3Q9Y243 479 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 ATP8A1Q9Y2Q0 1164 aa17.96■□□□□ 0.47
LAPTM4B-201ENST00000445593 SMIM23A6NLE4 172 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 CXCL8P10145 99 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 TMOD1P28289 359 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 ADORA2AP29274 412 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 HPDP32754 393 aaPredicted RBP17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 VPS41P49754 854 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 CAVIN3Q969G5 261 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 CALR3Q96L12 384 aaKnown RBP17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 PCDHB2Q9Y5E7 798 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 CES2O00748 559 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 TOM1L1O75674 476 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 CLTAP09496 248 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 IQCF3P0C7M6 154 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 FGFR4P22455 802 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 CDR1P51861 262 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 TRPC3Q13507 836 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 FASTKD5Q7L8L6 764 aaKnown RBP17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 CCDC105Q8IYK2 499 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 MCOLN2Q8IZK6 566 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 AFG1LQ8WV93 481 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 ACSF2Q96CM8 615 aaPredicted RBP17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 KCNH4Q9UQ05 1017 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 PMM2O15305 246 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 TMEM191BP0C7N4 346 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 SNAPC2Q13487 334 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 TTLL4Q14679 1199 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 TTC27Q6P3X3 843 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 VTI1AQ96AJ9 217 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 ACO2Q99798 780 aaKnown RBP17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 ADAM22Q9P0K1 906 aa17.95■□□□□ 0.46
LAPTM4B-201ENST00000445593 PDHXO00330 501 aa17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 INSRRP14616 1297 aa17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 DHX9Q08211 1270 aaKnown RBP17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 IER5Q5VY09 327 aa17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 C11orf63Q6NUN7 778 aa17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 PRELID2Q8N945 189 aa17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 DAAM1Q9Y4D1 1078 aa17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 LDHAP00338 332 aaKnown RBP17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 CYP1A2P05177 515 aa17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 ACO1P21399 889 aaKnown RBP17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 CTNNA1P35221 906 aaKnown RBP17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 HSD17B3P37058 310 aa17.94■□□□□ 0.46
LAPTM4B-201ENST00000445593 NNTQ13423 1086 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms