RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 ROR1Q01973 937 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 AKAP17AQ02040 695 aaKnown RBP11.15□□□□□ -0.62
COMMD1-203ENST00000444166 EPHA7Q15375 998 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 PSAPL1Q6NUJ1 521 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 C1orf228Q6PIY5 440 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 TXNDC11Q6PKC3 985 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 PPP4R3CPQ6ZMV5 832 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 ANKS3Q6ZW76 656 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 MFSD6LQ8IWD5 586 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 TCEAL8Q8IYN2 117 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 DAGLBQ8NCG7 672 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 HAS1Q92839 578 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 FAM20AQ96MK3 541 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 CORO1BQ9BR76 489 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 SLC26A6Q9BXS9 759 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 ZSWIM4Q9H7M6 989 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 PDCD11Q14690 1871 aaKnown RBP11.15□□□□□ -0.63
COMMD1-203ENST00000444166 MYBPHLA2RUH7 354 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 TMEM8BA6NDV4 472 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 SRRM3A6NNA2 597 aaPredicted RBP11.14□□□□□ -0.63
COMMD1-203ENST00000444166 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 ATF2P15336 505 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 EPHA5P54756 1037 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 CCINQ13939 588 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 DGKKQ5KSL6 1271 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 PDZD4Q76G19 769 aaPredicted RBP11.14□□□□□ -0.63
COMMD1-203ENST00000444166 KBTBD6Q86V97 674 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 C3orf58Q8NDZ4 430 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 GAB3Q8WWW8 586 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 GATA6Q92908 595 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 BRF1Q92994 677 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 RSPRY1Q96DX4 576 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 DYDC2Q96IM9 177 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 PRIMPOLQ96LW4 560 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 PDZD7Q9H5P4 517 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 C8orf33Q9H7E9 229 aaPredicted RBP11.14□□□□□ -0.63
COMMD1-203ENST00000444166 SNTG2Q9NY99 539 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 PCDHGA5Q9Y5G8 931 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 INSL5Q9Y5Q6 135 aa11.14□□□□□ -0.63
COMMD1-203ENST00000444166 MAST4O15021 2626 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 CCDC163A0A0D9SF12 145 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 HEPACAM2A8MVW5 462 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 PRRG1O14668 218 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 GIPC1O14908 333 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 CHADO15335 359 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 DGAT1O75907 488 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 B3GAT3O94766 335 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 LYPLA2O95372 231 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 SEC24AO95486 1093 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 HMGB1P09429 215 aaKnown RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 CPA1P15085 419 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 CTHP32929 405 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 SOX9P48436 509 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 NOVA1P51513 510 aaKnown RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 CYP4A11Q02928 519 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 FCHO2Q0JRZ9 810 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 CTTNQ14247 550 aaKnown RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 KRT32Q14532 448 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 FAM187BQ17R55 369 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 INF2Q27J81 1249 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 CDCA2Q69YH5 1023 aaPredicted RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 PPP4R3AQ6IN85 833 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 LRSAM1Q6UWE0 723 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 Q6ZUG5 572 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 CACNA2D4Q7Z3S7 1137 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 BLIDQ8IZY5 108 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 FBXL16Q8N461 479 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 ZSCAN18Q8TBC5 510 aaPredicted RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 ZC3H10Q96K80 434 aaKnown RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 PPP1R10Q96QC0 940 aaKnown RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 AGXT2Q9BYV1 514 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 ADAM33Q9BZ11 813 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 SLKQ9H2G2 1235 aaPredicted RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 FZD8Q9H461 694 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 SMOC1Q9H4F8 434 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 CEP72Q9P209 647 aa11.13□□□□□ -0.63
COMMD1-203ENST00000444166 SMG1Q96Q15 3661 aaKnown RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 ASCC3Q8N3C0 2202 aaKnown RBP11.13□□□□□ -0.63
COMMD1-203ENST00000444166 PCNX2A6NKB5 2137 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 EML5Q05BV3 1969 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 SLC38A8A6NNN8 435 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 SPECC1L-ADORA2AF8WAN1 911 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 I3L4J1 428 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 TBX3O15119 743 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 EXTL3O43909 919 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 RPP40O75818 363 aaKnown RBP11.12□□□□□ -0.63
COMMD1-203ENST00000444166 AKAP3O75969 853 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 SLITRK3O94933 977 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 GJA1P17302 382 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 SPINK2P20155 84 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 ELF1P32519 619 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 MPLP40238 635 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 BRCC3P46736 316 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 CLCNKBP51801 687 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 RING1Q06587 406 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 ZNF252P-AS1Q0IIN9 211 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 UPP1Q16831 310 aa11.12□□□□□ -0.63
COMMD1-203ENST00000444166 CYP4A22Q5TCH4 519 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms