RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ZNF185O15231 689 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 SPTLC2O15270 562 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 HOXA2O43364 376 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 ACSL4O60488 711 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 GUCY1B2O75343 617 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 GLRX3O76003 335 aaKnown RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 ZBED1O96006 694 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 KRT5P13647 590 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CDH3P22223 829 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CCNCP24863 283 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 HIBADHP31937 336 aaKnown RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 KRT20P35900 424 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 RTP1P59025 263 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 MRPS9P82933 396 aaKnown RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 CHRNDQ07001 517 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 RBL2Q08999 1139 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 STK4Q13043 487 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 ATP1A4Q13733 1029 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 VGLL4Q14135 290 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CRY1Q16526 586 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 SPRYD7Q5W111 196 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 OR52E8Q6IFG1 317 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 DUS1LQ6P1R4 473 aaKnown RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 G2E3Q7L622 706 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CROCCP3Q8IVE0 287 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 ARHGAP24Q8N264 748 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 C7orf57Q8NEG2 295 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 STARD8Q92502 1023 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 TSNARE1Q96NA8 513 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CYTH2Q99418 400 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 COL25A1Q9BXS0 654 aaPredicted RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 DCLRE1BQ9H816 532 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 TMEM39AQ9NV64 488 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 KLHL42Q9P2K6 505 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 SEPT9Q9UHD8 586 aaPredicted RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 FBXL5Q9UKA1 691 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 AGAP1Q9UPQ3 857 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 KCNH4Q9UQ05 1017 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 TACC3Q9Y6A5 838 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 ANKRD26Q9UPS8 1709 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CDC42BPGQ6DT37 1551 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CABIN1Q9Y6J0 2220 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 SMIM31A0A1B0GVY4 71 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 GOLGA8MH3BSY2 632 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CAPN9O14815 690 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 ORC4O43929 436 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 PRLP01236 227 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 LYNP07948 512 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 KRT7P08729 469 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 ENPP1P22413 925 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 RXRGP48443 463 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 GPC3P51654 580 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 NDUFA8P51970 172 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 RABGGTBP53611 331 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 IST1P53990 364 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 FCGRTP55899 365 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 RNASE9P60153 205 aaKnown RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 SNAP25P60880 206 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 TNNC1P63316 161 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 RELAQ04206 551 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 PPARAQ07869 468 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 MED21Q13503 144 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CTC1Q2NKJ3 1217 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 C10orf76Q5T2E6 689 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 NSMFQ6X4W1 530 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 RALYLQ86SE5 291 aaKnown RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 CLEC10AQ8IUN9 316 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 LRRC34Q8IZ02 419 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 SCYL3Q8IZE3 742 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 AGGF1Q8N302 714 aaeCLIP2.94□□□□□ -1.94
LIG4-203ENST00000442234 ANKRD44Q8N8A2 993 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 OR2W6PQ8NHA6 318 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 MDM1Q8TC05 714 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 ATP8B4Q8TF62 1192 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CCDC51Q96ER9 411 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 PSKH2Q96QS6 385 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CCDC77Q9BR77 488 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 CRNKL1Q9BZJ0 848 aaKnown RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 GBA3Q9H227 469 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 HMX1Q9NP08 348 aaPredicted RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 KCNK9Q9NPC2 374 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 TIMMDC1Q9NPL8 285 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 PIH1D3Q9NQM4 214 aaKnown RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 FAIMQ9NVQ4 179 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 PTTG2Q9NZH5 202 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 KLF15Q9UIH9 416 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 ANGPTL2Q9UKU9 493 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 USP15Q9Y4E8 981 aaPredicted RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 EPN1Q9Y6I3 576 aaPredicted RBP2.94□□□□□ -1.94
LIG4-203ENST00000442234 KIF13BQ9NQT8 1826 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 SHANK3Q9BYB0 1731 aa2.94□□□□□ -1.94
LIG4-203ENST00000442234 A0A0U1RQJ8 604 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ZNF233A6NK53 670 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 BTBD19C9JJ37 291 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 FAM47E-STBD1D6RA91 191 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TAF4O00268 1085 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RGS16O15492 202 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 SGTAO43765 313 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 DXOO77932 396 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 HAUS5O94927 633 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms