RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 SYN3O14994 580 aa21.86■■□□□ 1.09
UBE2F-215ENST00000441728 HARSP12081 509 aaKnown RBP21.86■■□□□ 1.09
UBE2F-215ENST00000441728 CEBPBP17676 345 aa21.86■■□□□ 1.09
UBE2F-215ENST00000441728 TARSP26639 723 aaKnown RBP21.86■■□□□ 1.09
UBE2F-215ENST00000441728 MAML2Q8IZL2 1156 aaPredicted RBP21.86■■□□□ 1.09
UBE2F-215ENST00000441728 SUMF1Q8NBK3 374 aa21.86■■□□□ 1.09
UBE2F-215ENST00000441728 SNX29Q8TEQ0 813 aa21.86■■□□□ 1.09
UBE2F-215ENST00000441728 DNASE1L2Q92874 299 aa21.86■■□□□ 1.09
UBE2F-215ENST00000441728 CDT1Q9H211 546 aa21.86■■□□□ 1.09
UBE2F-215ENST00000441728 FOXP1Q9H334 677 aaPredicted RBP21.86■■□□□ 1.09
UBE2F-215ENST00000441728 KMT5AQ9NQR1 393 aa21.86■■□□□ 1.09
UBE2F-215ENST00000441728 RAB23Q9ULC3 237 aa21.86■■□□□ 1.09
UBE2F-215ENST00000441728 NDRG2Q9UN36 371 aaKnown RBP21.86■■□□□ 1.09
UBE2F-215ENST00000441728 EP300Q09472 2414 aaPredicted RBP21.85■■□□□ 1.09
UBE2F-215ENST00000441728 MAN2B1O00754 1011 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 MCM4P33991 863 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 ADCY1Q08828 1119 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 CTXN3Q4LDR2 81 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 SLC8B1Q6J4K2 584 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 CEP120Q8N960 986 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 C3orf58Q8NDZ4 430 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 DRC1Q96MC2 740 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 ZNF512Q96ME7 567 aaPredicted RBP21.85■■□□□ 1.09
UBE2F-215ENST00000441728 AVENQ9NQS1 362 aaPredicted RBP21.85■■□□□ 1.09
UBE2F-215ENST00000441728 DNM3Q9UQ16 869 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 FANCMQ8IYD8 2048 aa21.85■■□□□ 1.09
UBE2F-215ENST00000441728 MED19A0JLT2 244 aaPredicted RBP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 ARHGEF37A1IGU5 675 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 WDR27A2RRH5 827 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 ATF2P15336 505 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 MARCKSP29966 332 aaPredicted RBP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 RPL9P32969 192 aaKnown RBP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 RPS9P46781 194 aaKnown RBP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 FXR2P51116 673 aaKnown RBP eCLIP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 STRN3Q13033 797 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 GRM2Q14416 872 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 RSPO4Q2I0M5 234 aaPredicted RBP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 SLC5A9Q2M3M2 681 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 TANGO2Q6ICL3 276 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 ZNF280DQ6N043 979 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 CCDC83Q8IWF9 413 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 APPL2Q8NEU8 664 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 IRF7Q92985 503 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 ACO2Q99798 780 aaKnown RBP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 TRMT61BQ9BVS5 477 aaKnown RBP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 TMEM134Q9H6X4 195 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 GMEB2Q9UKD1 530 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 SMG5Q9UPR3 1016 aaKnown RBP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 RBM19Q9Y4C8 960 aaKnown RBP21.84■■□□□ 1.09
UBE2F-215ENST00000441728 CACNA1IQ9P0X4 2223 aa21.84■■□□□ 1.09
UBE2F-215ENST00000441728 MCF2P10911 925 aa21.83■■□□□ 1.09
UBE2F-215ENST00000441728 CPB1P15086 417 aa21.83■■□□□ 1.09
UBE2F-215ENST00000441728 MATR3P43243 847 aaKnown RBP eCLIP21.83■■□□□ 1.092e-6■■■■□ 22
UBE2F-215ENST00000441728 NPTX2P47972 431 aa21.83■■□□□ 1.09
UBE2F-215ENST00000441728 TRAPPC10P48553 1259 aa21.83■■□□□ 1.09
UBE2F-215ENST00000441728 KRT79Q5XKE5 535 aa21.83■■□□□ 1.09
UBE2F-215ENST00000441728 TPGS2Q68CL5 300 aa21.83■■□□□ 1.09
UBE2F-215ENST00000441728 TARS2Q9BW92 718 aaKnown RBP21.83■■□□□ 1.09
UBE2F-215ENST00000441728 FAM126AQ9BYI3 521 aaPredicted RBP21.83■■□□□ 1.09
UBE2F-215ENST00000441728 PLA2G2FQ9BZM2 168 aa21.83■■□□□ 1.09
UBE2F-215ENST00000441728 USP18Q9UMW8 372 aa21.83■■□□□ 1.09
UBE2F-215ENST00000441728 INSL5Q9Y5Q6 135 aa21.83■■□□□ 1.09
UBE2F-215ENST00000441728 PATJQ8NI35 1801 aa21.83■■□□□ 1.08
UBE2F-215ENST00000441728 HIP1RO75146 1068 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 ABLIM3O94929 683 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 IGFBP6P24592 240 aaPredicted RBP21.82■■□□□ 1.08
UBE2F-215ENST00000441728 NRLP54845 237 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 HMGN5P82970 282 aaKnown RBP21.82■■□□□ 1.08
UBE2F-215ENST00000441728 SOX4Q06945 474 aaPredicted RBP21.82■■□□□ 1.08
UBE2F-215ENST00000441728 TSSK4Q6SA08 328 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 MPZL3Q6UWV2 235 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 TCEAL8Q8IYN2 117 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 CLDN23Q96B33 292 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 SLITRK6Q9H5Y7 841 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 CDV3Q9UKY7 258 aaKnown RBP21.82■■□□□ 1.08
UBE2F-215ENST00000441728 LIMCH1Q9UPQ0 1083 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 COL4A3Q01955 1670 aa21.82■■□□□ 1.08
UBE2F-215ENST00000441728 TBC1D4O60343 1298 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 MYL4P12829 197 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 GDI1P31150 447 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 LMNB2Q03252 620 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 ECM1Q16610 540 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 CD300LGQ6UXG3 332 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 YAF2Q8IY57 180 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 LEMD2Q8NC56 503 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 ZBTB44Q8NCP5 570 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 LLPHQ9BRT6 129 aaKnown RBP21.81■■□□□ 1.08
UBE2F-215ENST00000441728 ASAH2Q9NR71 780 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 DLL3Q9NYJ7 618 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 ANKFY1Q9P2R3 1169 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 KCNG1Q9UIX4 513 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 FBXL5Q9UKA1 691 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 TRIP11Q15643 1979 aa21.81■■□□□ 1.08
UBE2F-215ENST00000441728 MICAL2O94851 1124 aa21.8■■□□□ 1.08
UBE2F-215ENST00000441728 KCNE1P15382 129 aa21.8■■□□□ 1.08
UBE2F-215ENST00000441728 PDIA5Q14554 519 aa21.8■■□□□ 1.08
UBE2F-215ENST00000441728 ZRSR1Q15695 479 aaKnown RBP21.8■■□□□ 1.08
UBE2F-215ENST00000441728 XKR4Q5GH76 650 aa21.8■■□□□ 1.08
UBE2F-215ENST00000441728 FAM78AQ5JUQ0 283 aa21.8■■□□□ 1.08
UBE2F-215ENST00000441728 DEPDC1BQ8WUY9 529 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms