RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 EFEMP2O95967 443 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 ITGB1P05556 798 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 TNNI1P19237 187 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 CYP3A5P20815 502 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 LRPAP1P30533 357 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 FMO5P49326 533 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 TFAMQ00059 246 aaKnown RBP16.1■□□□□ 0.17
PLOD3-205ENST00000440925 FANCCQ00597 558 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 APBA1Q02410 837 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 NR1I3Q14994 352 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 SURF1Q15526 300 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 DUOXA2Q1HG44 320 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 VWA3BQ502W6 1294 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 TAS1R2Q8TE23 839 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 XYLT2Q9H1B5 865 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 COQ4Q9Y3A0 265 aa16.1■□□□□ 0.17
PLOD3-205ENST00000440925 GALTP07902 379 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 KRT13P13646 458 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 GTF2H1P32780 548 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 PBX3P40426 434 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 MTIF2P46199 727 aaKnown RBP16.09■□□□□ 0.17
PLOD3-205ENST00000440925 SLC11A1P49279 550 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 CLCNKBP51801 687 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 GRIK3Q13003 919 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 MAN2A1Q16706 1144 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 UPP1Q16831 310 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 EPC2Q52LR7 807 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 C9orf57Q5W0N0 161 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 TMEM173Q86WV6 379 aaPredicted RBP16.09■□□□□ 0.17
PLOD3-205ENST00000440925 CMTR2Q8IYT2 770 aaKnown RBP16.09■□□□□ 0.17
PLOD3-205ENST00000440925 HACE1Q8IYU2 909 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 TSPAN18Q96SJ8 248 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 ANP32EQ9BTT0 268 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 NDST4Q9H3R1 872 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 TMEM8AQ9HCN3 771 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
PLOD3-205ENST00000440925 UBQLN1Q9UMX0 589 aaKnown RBP16.09■□□□□ 0.17
PLOD3-205ENST00000440925 COLQQ9Y215 455 aaPredicted RBP16.09■□□□□ 0.17
PLOD3-205ENST00000440925 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.09■□□□□ 0.17
PLOD3-205ENST00000440925 PDE4DIPQ5VU43 2346 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 CITO14578 2027 aa16.09■□□□□ 0.17
PLOD3-205ENST00000440925 PDCD11Q14690 1871 aaKnown RBP16.08■□□□□ 0.17
PLOD3-205ENST00000440925 A0A1B0GTH6 734 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 CASTOR2A6NHX0 329 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 NT5C1B-RDH14C9J2C7 533 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 TULP1O00294 542 aaPredicted RBP16.08■□□□□ 0.16
PLOD3-205ENST00000440925 HOXA2O43364 376 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
PLOD3-205ENST00000440925 MYL6P60660 151 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 TUSC3Q13454 348 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 DCAF17Q5H9S7 520 aaPredicted RBP16.08■□□□□ 0.16
PLOD3-205ENST00000440925 TCERG1LQ5VWI1 586 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 NT5DC4Q86YG4 428 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 FAM114A1Q8IWE2 563 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 EHBP1Q8NDI1 1231 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 TATDN2Q93075 761 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 FNBP1Q96RU3 617 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 VN1R3Q9BXE9 311 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 APOBEC3GQ9HC16 384 aaKnown RBP16.08■□□□□ 0.16
PLOD3-205ENST00000440925 SIX2Q9NPC8 291 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 MARCH5Q9NX47 278 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 KANSL3Q9P2N6 904 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 INSL6Q9Y581 213 aa16.08■□□□□ 0.16
PLOD3-205ENST00000440925 LINC01553A4QN01 128 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 NRP1O14786 923 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 HLA-DRAP01903 254 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 AFPP02771 609 aaKnown RBP16.07■□□□□ 0.16
PLOD3-205ENST00000440925 ITGB3P05106 788 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 SLC9A1P19634 815 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 PBX1P40424 430 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 KLK7P49862 253 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 BCAR1P56945 870 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 BTG3Q14201 252 aaPredicted RBP16.07■□□□□ 0.16
PLOD3-205ENST00000440925 KRT39Q6A163 491 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 TAS1R1Q7RTX1 841 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 LIMS2Q7Z4I7 341 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 TDHQ8IZJ6 230 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 CLP1Q92989 425 aaKnown RBP16.07■□□□□ 0.16
PLOD3-205ENST00000440925 PI4K2AQ9BTU6 479 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 PBX4Q9BYU1 374 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 MAGEC2Q9UBF1 373 aaPredicted RBP16.07■□□□□ 0.16
PLOD3-205ENST00000440925 AGAP1Q9UPQ3 857 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 RALGAPA2Q2PPJ7 1873 aa16.07■□□□□ 0.16
PLOD3-205ENST00000440925 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.06■□□□□ 0.16
PLOD3-205ENST00000440925 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.06■□□□□ 0.16
PLOD3-205ENST00000440925 TLL1O43897 1013 aa16.06■□□□□ 0.16
PLOD3-205ENST00000440925 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
PLOD3-205ENST00000440925 POLR2BP30876 1174 aaKnown RBP16.06■□□□□ 0.16
PLOD3-205ENST00000440925 SPOPLQ6IQ16 392 aa16.06■□□□□ 0.16
PLOD3-205ENST00000440925 BEST2Q8NFU1 509 aa16.06■□□□□ 0.16
PLOD3-205ENST00000440925 URGCPQ8TCY9 931 aa16.06■□□□□ 0.16
PLOD3-205ENST00000440925 CACTINQ8WUQ7 758 aaKnown RBP16.06■□□□□ 0.16
PLOD3-205ENST00000440925 RPS6KC1Q96S38 1066 aa16.06■□□□□ 0.16
PLOD3-205ENST00000440925 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
PLOD3-205ENST00000440925 CRACR2AQ9BSW2 395 aa16.06■□□□□ 0.16
PLOD3-205ENST00000440925 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
PLOD3-205ENST00000440925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.06■□□□□ 0.16
PLOD3-205ENST00000440925 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms