RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 ORC3Q9UBD5 711 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 LCMT1Q9UIC8 334 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 TPCN1Q9ULQ1 816 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 PRG3Q9Y2Y8 225 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 CACNA1HO95180 2353 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 ARHGEF37A1IGU5 675 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 KRBA1A5PL33 1030 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 ZNF197O14709 1029 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 KINO60870 393 aaKnown RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 NPTXRO95502 500 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 SSBP05455 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 SP9P0CG40 484 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 SP100P23497 879 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 RPA1P27694 616 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 GJB2P29033 226 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 GTF2A1P52655 376 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 NRLP54845 237 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 CTTNQ14247 550 aaKnown RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 MLF2Q15773 248 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 TPGS2Q68CL5 300 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 ZNF579Q8NAF0 562 aaKnown RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 ZNF397Q8NF99 534 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 ASAP3Q8TDY4 903 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 NELL1Q92832 810 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 KCNN1Q92952 543 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 CLDN23Q96B33 292 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 IFT74Q96LB3 600 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 GPR88Q9GZN0 384 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 RGL1Q9NZL6 768 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 MTRRQ9UBK8 725 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 KCNJ14Q9UNX9 436 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 V9GYY5 206 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 SYN3O14994 580 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 LRP3O75074 770 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 N4BP1O75113 896 aaKnown RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 CYP11B2P19099 503 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 RPL9P32969 192 aaKnown RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 PRPF4BQ13523 1007 aaKnown RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 KYAT1Q16773 422 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 CT47A1Q5JQC4 288 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 SYT10Q6XYQ8 523 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 TAS1R1Q7RTX1 841 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 LNX1Q8TBB1 728 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 GJA10Q969M2 543 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 ELSPBP1Q96BH3 223 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 SPATA32Q96LK8 384 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 GPR62Q9BZJ7 368 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 CCDC113Q9H0I3 377 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 RASSF4Q9H2L5 321 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 NXF3Q9H4D5 531 aaKnown RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 TMEM134Q9H6X4 195 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 TOPORSQ9NS56 1045 aaPredicted RBP6.58□□□□□ -1.36
PTPRR-204ENST00000440835 MIOSQ9NXC5 875 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 PARP2Q9UGN5 583 aa6.58□□□□□ -1.36
PTPRR-204ENST00000440835 LAD1O00515 517 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 C2CD2LO14523 706 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 STX6O43752 255 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 ABCD1P33897 745 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 STK3Q13188 491 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 PLD1Q13393 1074 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 PDIA5Q14554 519 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 XKR4Q5GH76 650 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 NEK11Q8NG66 645 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 GPR152Q8TDT2 470 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 CPB2Q96IY4 423 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 RAB34Q9BZG1 259 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 RNF39Q9H2S5 420 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 PDZD7Q9H5P4 517 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 ZMYM5Q9UJ78 669 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 CDH22Q9UJ99 828 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 PDCD11Q14690 1871 aaKnown RBP6.57□□□□□ -1.36
PTPRR-204ENST00000440835 LRRIQ4A6NIV6 560 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 H3BQV1 296 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 STK25O00506 426 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 PI15O43692 258 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 LILRB5O75023 590 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 FGF19O95750 216 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 PRKCBP05771 671 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 C8AP07357 584 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 CFHP08603 1231 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 ZSCAN22P10073 491 aaPredicted RBP6.57□□□□□ -1.36
PTPRR-204ENST00000440835 TNNT1P13805 278 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 YARSP54577 528 aaKnown RBP6.57□□□□□ -1.36
PTPRR-204ENST00000440835 LRMPQ12912 555 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 NAB2Q15742 525 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 ICE2Q659A1 982 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 LARP1BQ659C4 914 aaKnown RBP6.57□□□□□ -1.36
PTPRR-204ENST00000440835 GET4Q7L5D6 327 aaPredicted RBP6.57□□□□□ -1.36
PTPRR-204ENST00000440835 NECAB1Q8N987 351 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 DEPTORQ8TB45 409 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 SYAP1Q96A49 352 aaPredicted RBP6.57□□□□□ -1.36
PTPRR-204ENST00000440835 CLSTN3Q9BQT9 956 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 FOXP1Q9H334 677 aaPredicted RBP6.57□□□□□ -1.36
PTPRR-204ENST00000440835 TRPV4Q9HBA0 871 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 ZSCAN32Q9NX65 697 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 TNFSF13BQ9Y275 285 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 NUMBLQ9Y6R0 609 aa6.57□□□□□ -1.36
PTPRR-204ENST00000440835 ARHGEF35A5YM69 484 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms