RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 VAV2P52735 878 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 MYL6P60660 151 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 NOP14P78316 857 aaKnown RBP12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 PCBP1Q15365 356 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 MTFR1Q15390 333 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 KYAT1Q16773 422 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 UBXN11Q5T124 520 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 MTERF4Q7Z6M4 381 aaKnown RBP12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 LNX1Q8TBB1 728 aaPredicted RBP12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 SLC20A1Q8WUM9 679 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 SHC3Q92529 594 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 OSBPL7Q9BZF2 842 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 TRIM6Q9C030 488 aaPredicted RBP12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 SENP6Q9GZR1 1112 aaPredicted RBP12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 ACP6Q9NPH0 428 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 DNAI1Q9UI46 699 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 NOD1Q9Y239 953 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 NUB1Q9Y5A7 615 aa12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 BZW2Q9Y6E2 419 aaKnown RBP12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 TDRD15B5MCY1 1934 aaKnown RBP12.34□□□□□ -0.43
SMPD4P2-201ENST00000440167 FANCGO15287 622 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 RPS6KA5O75582 802 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 SGPL1O95470 568 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 CALCAP01258 141 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 KRT19P08727 400 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 AKAP5P24588 427 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 MAGEA1P43355 309 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 GNG11P61952 73 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 TRPC3Q13507 836 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 CCDC122Q5T0U0 273 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 APBB1IPQ7Z5R6 666 aaPredicted RBP12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 WDR24Q96S15 920 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 RNF19AQ9NV58 838 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 WBP1LQ9NX94 342 aa12.33□□□□□ -0.43
SMPD4P2-201ENST00000440167 DDX3XO00571 662 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 CYP26A1O43174 497 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 ITGB3P05106 788 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 KRT5P13647 590 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 ETF1P62495 437 aaKnown RBP12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 RBM10P98175 930 aaKnown RBP12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 GCNT1Q02742 428 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 PTPN11Q06124 597 aaPredicted RBP12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 PTK7Q13308 1070 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 CUL2Q13617 745 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 TMEM132DQ14C87 1099 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 SCARA5Q6ZMJ2 495 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 GLYCTKQ8IVS8 523 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 ZNF710Q8N1W2 664 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 C1orf127Q8N9H9 656 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 U2AF1L4Q8WU68 220 aaKnown RBP12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 KIF12Q96FN5 646 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 SNX27Q96L92 541 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 PACSIN1Q9BY11 444 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 IMPG2Q9BZV3 1241 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 TRPV6Q9H1D0 765 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 ASB7Q9H672 318 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 STARD7Q9NQZ5 370 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 SEPT11Q9NVA2 429 aaKnown RBP12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 ST3GAL5Q9UNP4 418 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 DUSP10Q9Y6W6 482 aa12.33□□□□□ -0.44
SMPD4P2-201ENST00000440167 A0A0U1RQG5 324 aaPredicted RBP12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 KBTBD13C9JR72 458 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 KIF5CO60282 957 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 RECQL4O94761 1208 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 TUBB4AP04350 444 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 CCDC172P0C7W6 258 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 NFX1Q12986 1120 aaKnown RBP12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 BMS1Q14692 1282 aaKnown RBP12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 TRIM71Q2Q1W2 868 aaKnown RBP12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 ZNF699Q32M78 642 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 GLRA4Q5JXX5 417 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 ZNF569Q5MCW4 686 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 TAF3Q5VWG9 929 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 TWF2Q6IBS0 349 aaKnown RBP12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 ENOSF1Q7L5Y1 443 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 NOP9Q86U38 636 aaKnown RBP12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 RPAINQ86UA6 219 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 SLC47A2Q86VL8 602 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 VPS36Q86VN1 386 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 ARRDC4Q8NCT1 418 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 DEFB118Q96PH6 123 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 AGPAT1Q99943 283 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 AGO3Q9H9G7 860 aaKnown RBP12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 KLK14Q9P0G3 267 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 NENFQ9UMX5 172 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 IPPQ9Y573 584 aa12.32□□□□□ -0.44
SMPD4P2-201ENST00000440167 SCN5AQ14524 2016 aa12.31□□□□□ -0.44
SMPD4P2-201ENST00000440167 MACROD2A1Z1Q3 448 aa12.31□□□□□ -0.44
SMPD4P2-201ENST00000440167 TMCO5BA8MYB1 307 aa12.31□□□□□ -0.44
SMPD4P2-201ENST00000440167 CTIFO43310 598 aaKnown RBP12.31□□□□□ -0.44
SMPD4P2-201ENST00000440167 KRT86O43790 486 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms