RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 TRIM49P0CI25 452 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 TRIM49CP0CI26 452 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 PDHBP11177 359 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 MX2P20592 715 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 FXR2P51116 673 aaKnown RBP eCLIP6.72□□□□□ -1.33
BDNF-211ENST00000439476 STAT2P52630 851 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 THOC5Q13769 683 aaKnown RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 ARHGEF6Q15052 776 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 KYAT1Q16773 422 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 TMEM179Q6ZVK1 233 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 LRRC34Q8IZ02 419 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 KIAA0895Q8NCT3 520 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 CCDC138Q96M89 665 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 C2orf49Q9BVC5 232 aaPredicted RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 TUBA8Q9NY65 449 aaPredicted RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 R3HDM2Q9Y2K5 976 aaKnown RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 TNS3Q68CZ2 1445 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 HOXA13P31271 388 aaPredicted RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 INPP1P49441 399 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 TNFAIP2Q03169 654 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 KCTD2Q14681 263 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 TTBK2Q6IQ55 1244 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 DARS2Q6PI48 645 aaKnown RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 RAPH1Q70E73 1250 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 STAMBPL1Q96FJ0 436 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 TRIM62Q9BVG3 475 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 NDEL1Q9GZM8 345 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 INTS2Q9H0H0 1204 aaKnown RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 SNX25Q9H3E2 840 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 SLC38A10Q9HBR0 1119 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 GDF3Q9NR23 364 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 TBC1D22BQ9NU19 505 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 DDX56Q9NY93 547 aaKnown RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 MAD2L2Q9UI95 211 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 TTLL3Q9Y4R7 772 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 PJA2O43164 708 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 ZBED1O96006 694 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 KRT7P08729 469 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 YY1P25490 414 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 SFNP31947 248 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 GCLMP48507 274 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 RAD23BP54727 409 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 MCCD1P59942 119 aaPredicted RBP6.71□□□□□ -1.33
BDNF-211ENST00000439476 ERVK-9P63128 1117 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 LBRQ14739 615 aaKnown RBP6.71□□□□□ -1.33
BDNF-211ENST00000439476 SUPT20HL1Q3ZLR7 823 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 MTHFD1LQ6UB35 978 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 NCCRP1Q6ZVX7 275 aaPredicted RBP6.71□□□□□ -1.33
BDNF-211ENST00000439476 TRIM59Q8IWR1 403 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 ADGRF4Q8IZF3 695 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 SPICE1Q8N0Z3 855 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 KIF2BQ8N4N8 673 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 TNIP2Q8NFZ5 429 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 C1orf54Q8WWF1 131 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 PPWD1Q96BP3 646 aaKnown RBP6.71□□□□□ -1.33
BDNF-211ENST00000439476 HEMGNQ9BXL5 484 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 COA1Q9GZY4 146 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 PABPC3Q9H361 631 aaKnown RBP6.71□□□□□ -1.33
BDNF-211ENST00000439476 ATP6V0A4Q9HBG4 840 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 CNOT8Q9UFF9 292 aaKnown RBP6.71□□□□□ -1.33
BDNF-211ENST00000439476 ANAPC7Q9UJX3 599 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 GJA3Q9Y6H8 435 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 ZHX2Q9Y6X8 837 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 C1orf167Q5SNV9 1468 aa6.71□□□□□ -1.33
BDNF-211ENST00000439476 TRIM43BA6NCK2 446 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 WNT7AO00755 349 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ASAP2O43150 1006 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 CCDC22O60826 627 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 PHF2O75151 1096 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 SNAP25P60880 206 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ITGA7Q13683 1181 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 IRF2BP1Q8IU81 584 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 XXYLT1Q8NBI6 393 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 KCTD6Q8NC69 237 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 TTC16Q8NEE8 873 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ZNF564Q8TBZ8 553 aaPredicted RBP6.71□□□□□ -1.34
BDNF-211ENST00000439476 ACTRT1Q8TDG2 376 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 CEP170P1Q96L14 293 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 FAM193BQ96PV7 902 aaPredicted RBP6.71□□□□□ -1.34
BDNF-211ENST00000439476 MED15Q96RN5 788 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 MOV10L1Q9BXT6 1211 aaKnown RBP6.71□□□□□ -1.34
BDNF-211ENST00000439476 STK33Q9BYT3 514 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 MAGEB5Q9BZ81 275 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 UBXN6Q9BZV1 441 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 SAYSD1Q9NPB0 183 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 FBXO40Q9UH90 709 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 GINS2Q9Y248 185 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 MYO3BQ8WXR4 1341 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 CARNS1A5YM72 827 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 CCND1P24385 295 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 CTCFP49711 727 aaPredicted RBP6.71□□□□□ -1.34
BDNF-211ENST00000439476 RCN2Q14257 317 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 MAPRE2Q15555 327 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 INAQ16352 499 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 MARCH10Q8NA82 808 aaPredicted RBP6.71□□□□□ -1.34
BDNF-211ENST00000439476 SUN5Q8TC36 379 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ALKBH8Q96BT7 664 aaKnown RBP6.71□□□□□ -1.34
BDNF-211ENST00000439476 NUP85Q9BW27 656 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 PREBQ9HCU5 417 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 TUBGCP4Q9UGJ1 667 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms