RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CCDC124Q96CT7 223 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 LRRC37BQ96QE4 947 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 KIAA1683Q9H0B3 1180 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 TUFT1Q9NNX1 390 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 CHST7Q9NS84 486 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 RNF146Q9NTX7 359 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 HERC5Q9UII4 1024 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 DNAJC8O75937 253 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ECEL1O95672 775 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ITIH3Q06033 890 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 TTLL12Q14166 644 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 TKFCQ3LXA3 575 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 EGFL6Q8IUX8 553 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 CCNJLQ8IV13 435 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 CD302Q8IX05 232 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 MREGQ8N565 214 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 EFCAB3Q8N7B9 438 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 GMCL1P1Q8NEA9 526 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 SYN2Q92777 582 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 SLC5A5Q92911 643 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 WNK4Q96J92 1243 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 C11orf70Q9BRQ4 267 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 RHBDL2Q9NX52 303 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 MTUS1Q9ULD2 1270 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 EXOC1LA0A1B0GW35 172 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 KIAA0391O15091 583 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 RIPK2O43353 540 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 BRD2P25440 801 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 NOP14P78316 857 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 RCN1Q15293 331 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 SNRNP35Q16560 246 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 MIS18BP1Q6P0N0 1132 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 EPM2AIP1Q7L775 607 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 PRELID2Q8N945 189 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 NT5C1BQ96P26 610 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 WRNIP1Q96S55 665 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 SH3GL3Q99963 347 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 SAYSD1Q9NPB0 183 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 SIX2Q9NPC8 291 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 RPTORQ8N122 1335 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 TNRC6CQ9HCJ0 1690 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 WNT10BO00744 389 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 RARRES1P49788 294 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 ITGA8P53708 1063 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 IRX1P78414 480 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 PPATQ06203 517 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 HYIQ5T013 277 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 NBPF12Q5TAG4 269 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 LRRC57Q8N9N7 239 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 ACTRT1Q8TDG2 376 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 STMN2Q93045 179 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 ABTB1Q969K4 478 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 ADAM7Q9H2U9 754 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 ANAPC5Q9UJX4 755 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 PACSIN3Q9UKS6 424 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 ARL2BPQ9Y2Y0 163 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 RIPK3Q9Y572 518 aa10.55□□□□□ -0.72
CDC42SE1-202ENST00000439374 E2F8A0AVK6 867 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 OPHN1O60890 802 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 KRT19P08727 400 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 SRGAP2CP0DJJ0 459 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ETS1P14921 441 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 MAPK4P31152 587 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 POLGP54098 1239 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 GPC5P78333 572 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ADCY2Q08462 1091 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 TLDC1Q6P9B6 456 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 MTDHQ86UE4 582 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ECHDC2Q86YB7 292 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 CFAP61Q8NHU2 1237 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZNF564Q8TBZ8 553 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 SMYD3Q9H7B4 428 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 KRT36O76013 467 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ADRB2P07550 413 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 LINGO3P0C6S8 592 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ATF2P15336 505 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 CD19P15391 556 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 BTKQ06187 659 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 PPP2R5CQ13362 524 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 TSNAXIP1Q2TAA8 658 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 EML3Q32P44 896 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 WDR44Q5JSH3 913 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 DAW1Q8N136 415 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ANKRD35Q8N283 1001 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 FLAD1Q8NFF5 587 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 LRRC8CQ8TDW0 803 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 SNRNP27Q8WVK2 155 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 MAML1Q92585 1016 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 GBP5Q96PP8 586 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 SYT15Q9BQS2 421 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 A1CFQ9NQ94 594 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 FEM1BQ9UK73 627 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 PASKQ96RG2 1323 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 CCDC88AQ3V6T2 1871 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 IRF6O14896 467 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 RGL2O15211 777 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 RTN2O75298 545 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms