RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 NAB2Q15742 525 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 EXOC3L4Q17RC7 722 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 CBWD6Q4V339 395 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 EPC2Q52LR7 807 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 CBWD3Q5JTY5 395 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 CBWD5Q5RIA9 395 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
SCLT1-202ENST00000439369 CMTR2Q8IYT2 770 aaKnown RBP13.69□□□□□ -0.22
SCLT1-202ENST00000439369 LRRC43Q8N309 656 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 LRRC52Q8N7C0 313 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 HELQQ8TDG4 1101 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 CASD1Q96PB1 797 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 IMPG2Q9BZV3 1241 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 XPO4Q9C0E2 1151 aaKnown RBP13.69□□□□□ -0.22
SCLT1-202ENST00000439369 DPP3Q9NY33 737 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 SLC4A7Q9Y6M7 1214 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 PDCD11Q14690 1871 aaKnown RBP13.69□□□□□ -0.22
SCLT1-202ENST00000439369 ANO9A1A5B4 782 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 ZBBXA8MT70 800 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 RFX1P22670 979 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 CDC25BP30305 580 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 PBX1P40424 430 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 PNPLA4P41247 253 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 PIK3CAP42336 1068 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 ZNF75DP51815 510 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 DEFB103AP81534 67 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 RBP5P82980 135 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 DSC1Q08554 894 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 NCOA4Q13772 614 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 C1orf127Q8N9H9 656 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 CCDC150Q8NCX0 1101 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 CXorf38Q8TB03 319 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 ZNF689Q96CS4 500 aaPredicted RBP13.68□□□□□ -0.22
SCLT1-202ENST00000439369 FAM81BQ96LP2 452 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 GDF15Q99988 308 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 VRTNQ9H8Y1 702 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 PLCB1Q9NQ66 1216 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 TBC1D13Q9NVG8 400 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 RAB20Q9NX57 234 aa13.68□□□□□ -0.22
SCLT1-202ENST00000439369 R3HCC1Q9Y3T6 440 aaKnown RBP13.68□□□□□ -0.22
SCLT1-202ENST00000439369 ITIH6Q6UXX5 1313 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 AP5Z1O43299 807 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 GJB5O95377 273 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 VNN1O95497 513 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 HLA-DRAP01903 254 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 BMP8BP34820 402 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 HTRA4P83105 476 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-202ENST00000439369 TRPC3Q13507 836 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 SGSM1Q2NKQ1 1148 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 FIGNQ5HY92 759 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 GLRA4Q5JXX5 417 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 LMBRD2Q68DH5 695 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-202ENST00000439369 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-202ENST00000439369 EHBP1Q8NDI1 1231 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 TAS1R2Q8TE23 839 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 ANP32BQ92688 251 aaKnown RBP13.67□□□□□ -0.22
SCLT1-202ENST00000439369 C18orf25Q96B23 403 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-202ENST00000439369 ZNF560Q96MR9 790 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 TMEM175Q9BSA9 504 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 FAM124BQ9H5Z6 455 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-202ENST00000439369 MMRN2Q9H8L6 949 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 RC3H2Q9HBD1 1191 aaKnown RBP13.67□□□□□ -0.22
SCLT1-202ENST00000439369 MIOSQ9NXC5 875 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 GCNT4Q9P109 453 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 TUBGCP4Q9UGJ1 667 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 SIX4Q9UIU6 781 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 INPP5FQ9Y2H2 1132 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 SIK3Q9Y2K2 1263 aa13.67□□□□□ -0.22
SCLT1-202ENST00000439369 TBKBP1A7MCY6 615 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 TMEM189-UBE2V1I3L0A0 370 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 PIRO00625 290 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 TEX33O43247 280 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
SCLT1-202ENST00000439369 POMCP01189 267 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 ITGB3P05106 788 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 ATP2A2P16615 1042 aaKnown RBP13.66□□□□□ -0.22
SCLT1-202ENST00000439369 PON1P27169 355 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 RNASELQ05823 741 aaKnown RBP13.66□□□□□ -0.22
SCLT1-202ENST00000439369 MYO1EQ12965 1108 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 SYCP1Q15431 976 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 WDR44Q5JSH3 913 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 C9orf57Q5W0N0 161 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 HERC6Q8IVU3 1022 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 LMO3Q8TAP4 145 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 JAKMIP2Q96AA8 810 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 FAM193BQ96PV7 902 aaPredicted RBP13.66□□□□□ -0.22
SCLT1-202ENST00000439369 NUP58Q9BVL2 599 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 EDEM3Q9BZQ6 932 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 INTS2Q9H0H0 1204 aaKnown RBP13.66□□□□□ -0.22
SCLT1-202ENST00000439369 CXCL16Q9H2A7 254 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 FBXL5Q9UKA1 691 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 INSL6Q9Y581 213 aa13.66□□□□□ -0.22
SCLT1-202ENST00000439369 ARHGEF37A1IGU5 675 aa13.65□□□□□ -0.22
SCLT1-202ENST00000439369 H0YGN5 161 aa13.65□□□□□ -0.22
SCLT1-202ENST00000439369 TULP1O00294 542 aaPredicted RBP13.65□□□□□ -0.22
SCLT1-202ENST00000439369 UPP2O95045 317 aa13.65□□□□□ -0.22
SCLT1-202ENST00000439369 ADCY5O95622 1261 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms