RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ANAPC5Q9UJX4 755 aa16.39■□□□□ 0.21
APP-208ENST00000439274 USP15Q9Y4E8 981 aaPredicted RBP16.39■□□□□ 0.21
APP-208ENST00000439274 TELO2Q9Y4R8 837 aa16.39■□□□□ 0.21
APP-208ENST00000439274 TESPA1A2RU30 521 aaPredicted RBP16.39■□□□□ 0.21
APP-208ENST00000439274 HGSO14964 777 aaPredicted RBP16.39■□□□□ 0.21
APP-208ENST00000439274 C21orf2O43822 256 aa16.39■□□□□ 0.21
APP-208ENST00000439274 KCNJ2P63252 427 aa16.39■□□□□ 0.21
APP-208ENST00000439274 RSBN1LQ6PCB5 846 aaPredicted RBP16.39■□□□□ 0.21
APP-208ENST00000439274 PASD1Q8IV76 773 aa16.39■□□□□ 0.21
APP-208ENST00000439274 CNKSR1Q969H4 720 aa16.39■□□□□ 0.21
APP-208ENST00000439274 MYPNQ86TC9 1320 aa16.38■□□□□ 0.21
APP-208ENST00000439274 BRAFP15056 766 aa16.38■□□□□ 0.21
APP-208ENST00000439274 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
APP-208ENST00000439274 SPOPLQ6IQ16 392 aa16.38■□□□□ 0.21
APP-208ENST00000439274 ANKS1BQ7Z6G8 1248 aa16.38■□□□□ 0.21
APP-208ENST00000439274 ZNF516Q92618 1163 aa16.38■□□□□ 0.21
APP-208ENST00000439274 C9orf72Q96LT7 481 aa16.38■□□□□ 0.21
APP-208ENST00000439274 CXorf56Q9H5V9 222 aa16.38■□□□□ 0.21
APP-208ENST00000439274 WDR64B1ANS9 1081 aa16.38■□□□□ 0.21
APP-208ENST00000439274 HNRNPDLO14979 420 aaKnown RBP16.38■□□□□ 0.21
APP-208ENST00000439274 GJB6O95452 261 aa16.38■□□□□ 0.21
APP-208ENST00000439274 WNT7BP56706 349 aa16.38■□□□□ 0.21
APP-208ENST00000439274 TAS2R40P59535 323 aa16.38■□□□□ 0.21
APP-208ENST00000439274 MCF2L2Q86YR7 1114 aa16.38■□□□□ 0.21
APP-208ENST00000439274 TMC2Q8TDI7 906 aa16.38■□□□□ 0.21
APP-208ENST00000439274 FBXL18Q96ME1 805 aa16.38■□□□□ 0.21
APP-208ENST00000439274 GAS8O95995 478 aa16.37■□□□□ 0.21
APP-208ENST00000439274 MCCD1P59942 119 aaPredicted RBP16.37■□□□□ 0.21
APP-208ENST00000439274 NCALDP61601 193 aa16.37■□□□□ 0.21
APP-208ENST00000439274 NEDD9Q14511 834 aa16.37■□□□□ 0.21
APP-208ENST00000439274 SRRM1Q8IYB3 904 aaKnown RBP16.37■□□□□ 0.21
APP-208ENST00000439274 TIPINQ9BVW5 301 aa16.37■□□□□ 0.21
APP-208ENST00000439274 TRAIPQ9BWF2 469 aa16.37■□□□□ 0.21
APP-208ENST00000439274 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
APP-208ENST00000439274 USTQ9Y2C2 406 aa16.37■□□□□ 0.21
APP-208ENST00000439274 SORBS3O60504 671 aa16.37■□□□□ 0.21
APP-208ENST00000439274 SP4Q02446 784 aa16.37■□□□□ 0.21
APP-208ENST00000439274 DHX37Q8IY37 1157 aaKnown RBP16.37■□□□□ 0.21
APP-208ENST00000439274 GPD1LQ8N335 351 aa16.37■□□□□ 0.21
APP-208ENST00000439274 ATL2Q8NHH9 583 aa16.37■□□□□ 0.21
APP-208ENST00000439274 CKAP2Q8WWK9 683 aa16.37■□□□□ 0.21
APP-208ENST00000439274 BICD1Q96G01 975 aa16.37■□□□□ 0.21
APP-208ENST00000439274 CEP170P1Q96L14 293 aa16.37■□□□□ 0.21
APP-208ENST00000439274 RMDN3Q96TC7 470 aa16.37■□□□□ 0.21
APP-208ENST00000439274 C11orf70Q9BRQ4 267 aa16.37■□□□□ 0.21
APP-208ENST00000439274 ECT2Q9H8V3 914 aa16.37■□□□□ 0.21
APP-208ENST00000439274 C1orf112Q9NSG2 853 aa16.37■□□□□ 0.21
APP-208ENST00000439274 KLHL11Q9NVR0 708 aa16.37■□□□□ 0.21
APP-208ENST00000439274 ZNF862O60290 1169 aa16.36■□□□□ 0.21
APP-208ENST00000439274 CD58P19256 250 aa16.36■□□□□ 0.21
APP-208ENST00000439274 KCNA3P22001 575 aa16.36■□□□□ 0.21
APP-208ENST00000439274 SSR1P43307 286 aaKnown RBP16.36■□□□□ 0.21
APP-208ENST00000439274 NSFP46459 744 aaKnown RBP16.36■□□□□ 0.21
APP-208ENST00000439274 GCNT1Q02742 428 aa16.36■□□□□ 0.21
APP-208ENST00000439274 KIF2BQ8N4N8 673 aa16.36■□□□□ 0.21
APP-208ENST00000439274 GIMAP7Q8NHV1 300 aa16.36■□□□□ 0.21
APP-208ENST00000439274 MAGEC3Q8TD91 643 aa16.36■□□□□ 0.21
APP-208ENST00000439274 ANKEF1Q9NU02 776 aa16.36■□□□□ 0.21
APP-208ENST00000439274 NAALADL1Q9UQQ1 740 aa16.36■□□□□ 0.21
APP-208ENST00000439274 NEU2Q9Y3R4 380 aa16.36■□□□□ 0.21
APP-208ENST00000439274 UMODL1Q5DID0 1318 aa16.36■□□□□ 0.21
APP-208ENST00000439274 COL4A5P29400 1685 aa16.36■□□□□ 0.21
APP-208ENST00000439274 JAK3P52333 1124 aa16.36■□□□□ 0.21
APP-208ENST00000439274 KLF1Q13351 362 aaPredicted RBP16.36■□□□□ 0.21
APP-208ENST00000439274 ACCSLQ4AC99 568 aa16.36■□□□□ 0.21
APP-208ENST00000439274 IZUMO3Q5VZ72 239 aa16.36■□□□□ 0.21
APP-208ENST00000439274 CGB2Q6NT52 195 aa16.36■□□□□ 0.21
APP-208ENST00000439274 OGFOD1Q8N543 542 aa16.36■□□□□ 0.21
APP-208ENST00000439274 GRK7Q8WTQ7 553 aa16.36■□□□□ 0.21
APP-208ENST00000439274 TGS1Q96RS0 853 aaKnown RBP16.36■□□□□ 0.21
APP-208ENST00000439274 PDCD2LQ9BRP1 358 aa16.36■□□□□ 0.21
APP-208ENST00000439274 AVENQ9NQS1 362 aaPredicted RBP16.36■□□□□ 0.21
APP-208ENST00000439274 GABBR1Q9UBS5 961 aa16.36■□□□□ 0.21
APP-208ENST00000439274 SUN1O94901 812 aa16.35■□□□□ 0.21
APP-208ENST00000439274 PROSCO94903 275 aa16.35■□□□□ 0.21
APP-208ENST00000439274 ASNSP08243 561 aa16.35■□□□□ 0.21
APP-208ENST00000439274 FDX1P10109 184 aa16.35■□□□□ 0.21
APP-208ENST00000439274 ATP5DP30049 168 aa16.35■□□□□ 0.21
APP-208ENST00000439274 DSG3P32926 999 aa16.35■□□□□ 0.21
APP-208ENST00000439274 CYP4F22Q6NT55 531 aa16.35■□□□□ 0.21
APP-208ENST00000439274 SYDE1Q6ZW31 735 aaPredicted RBP16.35■□□□□ 0.21
APP-208ENST00000439274 TAS1R3Q7RTX0 852 aa16.35■□□□□ 0.21
APP-208ENST00000439274 SPATA21Q7Z572 469 aa16.35■□□□□ 0.21
APP-208ENST00000439274 SLC17A8Q8NDX2 589 aa16.35■□□□□ 0.21
APP-208ENST00000439274 RMDN2Q96LZ7 410 aa16.35■□□□□ 0.21
APP-208ENST00000439274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.35■□□□□ 0.21
APP-208ENST00000439274 PTPRJQ12913 1337 aa16.35■□□□□ 0.21
APP-208ENST00000439274 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.211e-6■■■■□ 19.9
APP-208ENST00000439274 EZRP15311 586 aaKnown RBP16.35■□□□□ 0.21
APP-208ENST00000439274 GTF2H1P32780 548 aa16.35■□□□□ 0.21
APP-208ENST00000439274 STX2P32856 288 aa16.35■□□□□ 0.21
APP-208ENST00000439274 MAN1A1P33908 653 aa16.35■□□□□ 0.21
APP-208ENST00000439274 NF2P35240 595 aa16.35■□□□□ 0.21
APP-208ENST00000439274 SLC1A1P43005 524 aa16.35■□□□□ 0.21
APP-208ENST00000439274 GALNTL6Q49A17 601 aa16.35■□□□□ 0.21
APP-208ENST00000439274 TMEM63BQ5T3F8 832 aa16.35■□□□□ 0.21
APP-208ENST00000439274 ZNF365Q70YC5 407 aa16.35■□□□□ 0.21
APP-208ENST00000439274 MON1BQ7L1V2 547 aa16.35■□□□□ 0.21
APP-208ENST00000439274 FITM2Q8N6M3 262 aa16.35■□□□□ 0.21
APP-208ENST00000439274 MAIP1Q8WWC4 291 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms