RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 TRABDQ9H4I3 376 aa18.08■□□□□ 0.49
PTPRF-209ENST00000438120 JMJD4Q9H9V9 463 aa18.08■□□□□ 0.49
PTPRF-209ENST00000438120 NYAP2Q9P242 653 aa18.08■□□□□ 0.49
PTPRF-209ENST00000438120 SLC1A1P43005 524 aa18.08■□□□□ 0.49
PTPRF-209ENST00000438120 SBK1Q52WX2 424 aa18.08■□□□□ 0.49
PTPRF-209ENST00000438120 VCPKMTQ9H867 229 aa18.08■□□□□ 0.49
PTPRF-209ENST00000438120 DBR1Q9UK59 544 aaKnown RBP18.08■□□□□ 0.49
PTPRF-209ENST00000438120 MYO1DO94832 1006 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 SRGNP10124 158 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 TADA2BQ86TJ2 420 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 RBM46Q8TBY0 533 aaKnown RBP18.08■□□□□ 0.48
PTPRF-209ENST00000438120 TEKT2Q9UIF3 430 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 A0A1B0GTH6 734 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 KDSRQ06136 332 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 EFCAB12Q6NXP0 572 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 GJB7Q6PEY0 223 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 TCP11X1B4DZS4 312 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 MYO1CO00159 1063 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 TLR2O60603 784 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 NPEPPSP55786 919 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 SNAPC2Q13487 334 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 IL31Q6EBC2 164 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 TAGAPQ8N103 731 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 SH2D3CQ8N5H7 860 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 DCUN1D1Q96GG9 259 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 KIF2CQ99661 725 aa18.08■□□□□ 0.48
PTPRF-209ENST00000438120 MARCOQ9UEW3 520 aaPredicted RBP18.08■□□□□ 0.48
PTPRF-209ENST00000438120 XPO7Q9UIA9 1087 aaKnown RBP18.08■□□□□ 0.48
PTPRF-209ENST00000438120 C3orf70A6NLC5 250 aaPredicted RBP18.07■□□□□ 0.48
PTPRF-209ENST00000438120 TRAPPC3O43617 180 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 RPS6KA5O75582 802 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 GMPSP49915 693 aaPredicted RBP18.07■□□□□ 0.48
PTPRF-209ENST00000438120 SGSM1Q2NKQ1 1148 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 SLC25A41Q8N5S1 370 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 SLC7A5P2Q9GIP4 190 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 ATP5HO75947 161 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 KIZQ2M2Z5 673 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 C4orf33Q8N1A6 199 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 EFHBQ8N7U6 833 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 TEKT4Q8WW24 435 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 OTULINQ96BN8 352 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 CATSPER3Q86XQ3 398 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 ATPAF2Q8N5M1 289 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 ASAP3Q8TDY4 903 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 DACH2Q96NX9 599 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 ZNF212Q9UDV6 495 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 RHOBTB3O94955 611 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 AURKCQ9UQB9 309 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 C19orf81C9J6K1 198 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 SEZ6Q53EL9 994 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 ATF7IP2Q5U623 682 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 OR2W6PQ8NHA6 318 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 ELMO2Q96JJ3 720 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 ZNF512Q96ME7 567 aaPredicted RBP18.07■□□□□ 0.48
PTPRF-209ENST00000438120 RBM15Q96T37 977 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTPRF-209ENST00000438120 GOLPH3Q9H4A6 298 aa18.07■□□□□ 0.48
PTPRF-209ENST00000438120 EEF2KO00418 725 aaKnown RBP18.06■□□□□ 0.48
PTPRF-209ENST00000438120 CYBBP04839 570 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 KLRK1P26718 216 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 ZC3H12BQ5HYM0 836 aaKnown RBP18.06■□□□□ 0.48
PTPRF-209ENST00000438120 HLA-DRAP01903 254 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 ENO1P06733 434 aaKnown RBP18.06■□□□□ 0.48
PTPRF-209ENST00000438120 ITPK1Q13572 414 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 MGAT5BQ3V5L5 792 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 ACSF2Q96CM8 615 aaPredicted RBP18.06■□□□□ 0.48
PTPRF-209ENST00000438120 MUC3BQ9H195 1237 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 TFR2Q9UP52 801 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 HSPA9P38646 679 aaKnown RBP18.06■□□□□ 0.48
PTPRF-209ENST00000438120 PDAP1Q13442 181 aaKnown RBP18.06■□□□□ 0.48
PTPRF-209ENST00000438120 SLC7A14Q8TBB6 771 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 COG1Q8WTW3 980 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 MOV10L1Q9BXT6 1211 aaKnown RBP18.06■□□□□ 0.48
PTPRF-209ENST00000438120 ASPSCR1Q9BZE9 553 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 HACL1Q9UJ83 578 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 ARHGEF40Q8TER5 1519 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 DAB2P98082 770 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 CYP4A22Q5TCH4 519 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 ATG4CQ96DT6 458 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 SYNDIG1Q9H7V2 258 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 SPON1Q9HCB6 807 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 SNX5Q9Y5X3 404 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 ENTPD3O75355 529 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 KCNJ6P48051 423 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 SPDYAQ5MJ70 313 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 MXRA8Q9BRK3 442 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 TRIM62Q9BVG3 475 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 KCNF1Q9H3M0 494 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 RUBCNLQ9H714 662 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 MYOZ2Q9NPC6 264 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.06■□□□□ 0.481e-6■■■□□ 15.9
PTPRF-209ENST00000438120 ZC3H7BQ9UGR2 993 aaKnown RBP18.06■□□□□ 0.48
PTPRF-209ENST00000438120 MAD2L2Q9UI95 211 aa18.06■□□□□ 0.48
PTPRF-209ENST00000438120 KBTBD13C9JR72 458 aa18.05■□□□□ 0.48
PTPRF-209ENST00000438120 ETFBP38117 255 aa18.05■□□□□ 0.48
PTPRF-209ENST00000438120 AP2B1P63010 937 aa18.05■□□□□ 0.48
PTPRF-209ENST00000438120 NAF1Q96HR8 494 aaKnown RBP18.05■□□□□ 0.48
PTPRF-209ENST00000438120 TAAR1Q96RJ0 339 aa18.05■□□□□ 0.48
PTPRF-209ENST00000438120 FAM95CA0A1B0GW59 222 aa18.05■□□□□ 0.48
PTPRF-209ENST00000438120 NTSR2O95665 410 aa18.05■□□□□ 0.48
PTPRF-209ENST00000438120 CSF1RP07333 972 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms