RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MMP13P45452 471 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 NLRP11P59045 1033 aaKnown RBP11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 ANKS1BQ7Z6G8 1248 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 YTHDF3Q7Z739 585 aaKnown RBP11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 PASD1Q8IV76 773 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 PGM2Q96G03 612 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 C5orf60A6NFR6 353 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 RGS16O15492 202 aaPredicted RBP11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 PEX10O60683 326 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 ZBED4O75132 1171 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 ACSL3O95573 720 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 KRT17Q04695 432 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 FSTL1Q12841 308 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 LONRF1Q17RB8 773 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 SGO2Q562F6 1265 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 SNRNP48Q6IEG0 339 aaKnown RBP11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 PRUNE1Q86TP1 453 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 SPATS2Q86XZ4 545 aaKnown RBP11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 CCDC13Q8IYE1 715 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 MCOLN2Q8IZK6 566 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 SAMD3Q8N6K7 520 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 ZNF513Q8N8E2 541 aaPredicted RBP11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 SPIRE2Q8WWL2 714 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 ZNF317Q96PQ6 595 aaPredicted RBP11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 HEMGNQ9BXL5 484 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 MTUS1Q9ULD2 1270 aa11.11□□□□□ -0.63
CLSTN1-203ENST00000435891 ECEL1O95672 775 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 GGPS1O95749 300 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 VPS41P49754 854 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 SP2Q02086 613 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 PRKCEQ02156 737 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 PPP1R7Q15435 360 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 MTERF2Q49AM1 385 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 C15orf39Q6ZRI6 1047 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 KIFAP3Q92845 792 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 FAM129AQ9BZQ8 928 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 CDC42EP4Q9H3Q1 356 aaKnown RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 LRRC19Q9H756 370 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 STK32BQ9NY57 414 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 MTRF1LQ9UGC7 380 aaKnown RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 G3BP2Q9UN86 482 aaKnown RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 TNS1Q9HBL0 1735 aaKnown RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 EME2A4GXA9 379 aaPredicted RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 FSCN2O14926 492 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 EDN1P05305 212 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 AUHQ13825 339 aaKnown RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 CLUL1Q15846 466 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 SEZ6Q53EL9 994 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 TDRD10Q5VZ19 366 aaKnown RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 CIAPIN1Q6FI81 312 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 CPLX4Q7Z7G2 160 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 C12orf50Q8NA57 414 aaPredicted RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 MORC4Q8TE76 937 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 TMEM143Q96AN5 459 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 CAMKK2Q96RR4 588 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 TACO1Q9BSH4 297 aaKnown RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 YIPF3Q9GZM5 350 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 POLR3FQ9H1D9 316 aaPredicted RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 ZNF541Q9H0D2 1346 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 RARGP13631 454 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 IVDP26440 423 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 CDC25CP30307 473 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 DSG3P32926 999 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 IFNAR2P48551 515 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 GCNT1Q02742 428 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 ZNF568Q3ZCX4 644 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 PREPLQ4J6C6 727 aaPredicted RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 OTUD6AQ7L8S5 288 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 REPS2Q8NFH8 660 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 CCDC113Q9H0I3 377 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 APOBEC3GQ9HC16 384 aaKnown RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 CYP26B1Q9NR63 512 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 MAP3K20Q9NYL2 800 aaKnown RBP11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 ARHGAP28Q9P2N2 729 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 CTNNAL1Q9UBT7 734 aa11.1□□□□□ -0.63
CLSTN1-203ENST00000435891 UMODL1Q5DID0 1318 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 COL11A1P12107 1806 aaPredicted RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 VNN1O95497 513 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 CCND2P30279 289 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 CHMP6Q96FZ7 201 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 PRMT1Q99873 361 aaKnown RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 ZNF214Q9UL59 606 aaPredicted RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 HLA-DRAP01903 254 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 TNNI1P19237 187 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 ATP4AP20648 1035 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 HMGCS2P54868 508 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 TAS2R40P59535 323 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 ACTR2P61160 394 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 BRDTQ58F21 947 aaPredicted RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 CRELD2Q6UXH1 353 aaPredicted RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 HOMEZQ8IX15 550 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 HVCN1Q96D96 273 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 DDX27Q96GQ7 796 aaKnown RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 JPH1Q9HDC5 661 aaPredicted RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 ASIC3Q9UHC3 531 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 CNOT7Q9UIV1 285 aaKnown RBP11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 RASGRF2O14827 1237 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 TMEM132BQ14DG7 1078 aa11.09□□□□□ -0.63
CLSTN1-203ENST00000435891 TNFAIP8L3Q5GJ75 292 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms