RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 C18orf8Q96DM3 657 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 ZIM3Q96PE6 472 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 C2orf40Q9H1Z8 148 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 ZNF148Q9UQR1 794 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 KRT1P04264 644 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 ACAD10Q6JQN1 1059 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 OR6J1Q8NGC5 347 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 PPANQ9NQ55 473 aaKnown RBP12.98□□□□□ -0.33
CLDN4-203ENST00000435050 RBPJLQ9UBG7 517 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 PARP2Q9UGN5 583 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 CPA4Q9UI42 421 aa12.98□□□□□ -0.33
CLDN4-203ENST00000435050 SPDYE5A6NIY4 337 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 HBP1O60381 514 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 GAS8O95995 478 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 TGFB3P10600 412 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 FMO1Q01740 532 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 CYP4A22Q5TCH4 519 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 DENND2CQ68D51 928 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 KCNV1Q6PIU1 500 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
CLDN4-203ENST00000435050 ATG4AQ8WYN0 398 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 TRIM7Q9C029 511 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 MRPL47Q9HD33 250 aaKnown RBP12.97□□□□□ -0.33
CLDN4-203ENST00000435050 COG5Q9UP83 839 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 CYP2B6P20813 491 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 PDCLQ13371 301 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 CDO1Q16878 200 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 FAM71AQ8IYT1 594 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 C1orf131Q8NDD1 294 aaKnown RBP12.97□□□□□ -0.33
CLDN4-203ENST00000435050 WHAMMQ8TF30 809 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 SHC3Q92529 594 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 FAM114A2Q9NRY5 505 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 UMODL1Q5DID0 1318 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 MYPNQ86TC9 1320 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 OGTO15294 1046 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 ECEL1O95672 775 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 GH1P01241 217 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 TBXAS1P24557 533 aaPredicted RBP12.97□□□□□ -0.33
CLDN4-203ENST00000435050 RDXP35241 583 aaKnown RBP12.97□□□□□ -0.33
CLDN4-203ENST00000435050 NFIL3Q16649 462 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 KIZQ2M2Z5 673 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 CELF3Q5SZQ8 465 aaKnown RBP12.97□□□□□ -0.33
CLDN4-203ENST00000435050 RNF187Q5TA31 235 aaPredicted RBP12.97□□□□□ -0.33
CLDN4-203ENST00000435050 CAPS2Q9BXY5 557 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 MROH8Q9H579 483 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 ARHGAP28Q9P2N2 729 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 PCSK1NQ9UHG2 260 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 GTF3C4Q9UKN8 822 aa12.97□□□□□ -0.33
CLDN4-203ENST00000435050 GOLGA8KD6RF30 607 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 MAP2K7O14733 419 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 ATP4AP20648 1035 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 CDH8P55286 799 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 ADCY1Q08828 1119 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 PPIL2Q13356 520 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 PLCB4Q15147 1175 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 PRAMEF19Q5SWL8 479 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 EEF1DP3Q658K8 133 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 TMEM35BQ8NCS4 154 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 ALG3Q92685 438 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 EXOC4Q96A65 974 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 AGAP1Q9UPQ3 857 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 PASKQ96RG2 1323 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 H0YHG0 523 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 NDUFAB1O14561 156 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 YBX3P16989 372 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLDN4-203ENST00000435050 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 GPAT2Q6NUI2 795 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 C12orf56Q8IXR9 622 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 ARL8AQ96BM9 186 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 TRIM11Q96F44 468 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 ZSWIM1Q9BR11 485 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 WNT8AQ9H1J5 351 aa12.96□□□□□ -0.33
CLDN4-203ENST00000435050 A0A0A6YYK5 440 aaPredicted RBP12.96□□□□□ -0.34
CLDN4-203ENST00000435050 MYL3P08590 195 aa12.96□□□□□ -0.34
CLDN4-203ENST00000435050 PSMD6Q15008 389 aa12.96□□□□□ -0.34
CLDN4-203ENST00000435050 NOL9Q5SY16 702 aaKnown RBP12.96□□□□□ -0.34
CLDN4-203ENST00000435050 HELQQ8TDG4 1101 aa12.96□□□□□ -0.34
CLDN4-203ENST00000435050 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.96□□□□□ -0.34
CLDN4-203ENST00000435050 FAM81BQ96LP2 452 aa12.96□□□□□ -0.34
CLDN4-203ENST00000435050 CGRRF1Q99675 332 aa12.96□□□□□ -0.34
CLDN4-203ENST00000435050 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.34
CLDN4-203ENST00000435050 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.34
CLDN4-203ENST00000435050 NR2E1Q9Y466 385 aa12.96□□□□□ -0.34
CLDN4-203ENST00000435050 NUB1Q9Y5A7 615 aa12.96□□□□□ -0.34
CLDN4-203ENST00000435050 MAFBQ9Y5Q3 323 aaPredicted RBP12.96□□□□□ -0.34
CLDN4-203ENST00000435050 ITGB3P05106 788 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 PYGMP11217 842 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 CETPP11597 493 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 HUNKP57058 714 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 CUL1Q13616 776 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 HP1BP3Q5SSJ5 553 aaPredicted RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 EXOC8Q8IYI6 725 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 BCAS4Q8TDM0 211 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 KIF12Q96FN5 646 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 MCEEQ96PE7 176 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 CARD9Q9H257 536 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 KCNK9Q9NPC2 374 aa12.95□□□□□ -0.34
CLDN4-203ENST00000435050 TTC7AQ9ULT0 858 aaPredicted RBP12.95□□□□□ -0.34
CLDN4-203ENST00000435050 NOVA2Q9UNW9 492 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms