RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 CTDP1Q9Y5B0 961 aaPredicted RBP14.57□□□□□ -0.08
COL6A3-207ENST00000433762 SCINQ9Y6U3 715 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 CFAP73A6NFT4 308 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 HNRNPDLO14979 420 aaKnown RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 NSFP46459 744 aaKnown RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 MNAT1P51948 309 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 PLA2G4FQ68DD2 849 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 CCDC91Q7Z6B0 441 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 PHF13Q86YI8 300 aaPredicted RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 FUKQ8N0W3 1084 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 BSNDQ8WZ55 320 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 CEP170P1Q96L14 293 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 COL11A1P12107 1806 aaPredicted RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 O00370 1275 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 LDHAP00338 332 aaKnown RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 OAS1P00973 400 aaKnown RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 TBXAS1P24557 533 aaPredicted RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 SLFN12LQ6IEE8 588 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 DRICH1Q6PGQ1 229 aaPredicted RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 EXOC3L1Q86VI1 746 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 RHOT1Q8IXI2 618 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 EXD1Q8NHP7 514 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.56□□□□□ -0.08
COL6A3-207ENST00000433762 ASIC3Q9UHC3 531 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 SSC5DA1L4H1 1573 aa14.56□□□□□ -0.08
COL6A3-207ENST00000433762 WNT10BO00744 389 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 DLATP10515 647 aaKnown RBP14.55□□□□□ -0.08
COL6A3-207ENST00000433762 MYCLP12524 364 aaPredicted RBP14.55□□□□□ -0.08
COL6A3-207ENST00000433762 KRT5P13647 590 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 ATF2P15336 505 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 KCNA2P16389 499 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 CETN2P41208 172 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
COL6A3-207ENST00000433762 CPXCR1Q8N123 301 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 BTBD6Q96KE9 485 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 PPCSQ9HAB8 311 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 PTPN22Q9Y2R2 807 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 ADGRA3Q8IWK6 1321 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 THAP12O43422 761 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 C4BPAP04003 597 aaKnown RBP14.55□□□□□ -0.08
COL6A3-207ENST00000433762 KCNJ1P48048 391 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 NR1H3Q13133 447 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 STAT4Q14765 748 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 PLEKHA7Q6IQ23 1121 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 CYB5D1Q6P9G0 228 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 CDAN1Q8IWY9 1227 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 NIM1KQ8IY84 436 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 LRRC34Q8IZ02 419 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 JPH2Q9BR39 696 aaPredicted RBP14.55□□□□□ -0.08
COL6A3-207ENST00000433762 CCDC77Q9BR77 488 aa14.55□□□□□ -0.08
COL6A3-207ENST00000433762 TMEM150BA6NC51 233 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 VWA5AO00534 786 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 ATP2A1O14983 1001 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 ZNF862O60290 1169 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 NR3C2P08235 984 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 PTPN7P35236 360 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 SNCBQ16143 134 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 XKR3Q5GH77 459 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 LRRC38Q5VT99 294 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 NSUN6Q8TEA1 469 aaKnown RBP14.54□□□□□ -0.08
COL6A3-207ENST00000433762 ARHGEF2Q92974 986 aaKnown RBP14.54□□□□□ -0.08
COL6A3-207ENST00000433762 TEPSINQ96N21 525 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 ACP6Q9NPH0 428 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 XPNPEP1Q9NQW7 623 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 CYP26B1Q9NR63 512 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 TOPORSQ9NS56 1045 aaPredicted RBP14.54□□□□□ -0.08
COL6A3-207ENST00000433762 GABBR1Q9UBS5 961 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 BCS1LQ9Y276 419 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 TESPA1A2RU30 521 aaPredicted RBP14.54□□□□□ -0.08
COL6A3-207ENST00000433762 VGLL3A8MV65 326 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 MGRN1O60291 552 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 SNX3O60493 162 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 CDH16O75309 829 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 ACO1P21399 889 aaKnown RBP14.54□□□□□ -0.08
COL6A3-207ENST00000433762 AP3M2P53677 418 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 SLC18A1P54219 525 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 RIPK1Q13546 671 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
COL6A3-207ENST00000433762 NSMFQ6X4W1 530 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 TAS1R3Q7RTX0 852 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 TRPM8Q7Z2W7 1104 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 PARP9Q8IXQ6 854 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 ABRAQ8N0Z2 381 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 C12orf42Q96LP6 360 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 FNBP1Q96RU3 617 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 POP1Q99575 1024 aaKnown RBP14.54□□□□□ -0.08
COL6A3-207ENST00000433762 PRMT1Q99873 361 aaKnown RBP14.54□□□□□ -0.08
COL6A3-207ENST00000433762 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 ANAPC5Q9UJX4 755 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 ADAMTS5Q9UNA0 930 aa14.54□□□□□ -0.08
COL6A3-207ENST00000433762 HLA-DRAP01903 254 aa14.53□□□□□ -0.08
COL6A3-207ENST00000433762 RRM1P23921 792 aa14.53□□□□□ -0.08
COL6A3-207ENST00000433762 SLC8A1P32418 973 aa14.53□□□□□ -0.08
COL6A3-207ENST00000433762 ITGA8P53708 1063 aa14.53□□□□□ -0.08
COL6A3-207ENST00000433762 COPS2P61201 443 aa14.53□□□□□ -0.08
COL6A3-207ENST00000433762 NOMO3P69849 1222 aa14.53□□□□□ -0.08
COL6A3-207ENST00000433762 MCL1Q07820 350 aa14.53□□□□□ -0.08
COL6A3-207ENST00000433762 C1orf54Q8WWF1 131 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms