RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CCDC105Q8IYK2 499 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 KCTD17Q8N5Z5 321 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 HAPLN2Q9GZV7 340 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 TBC1D17Q9HA65 648 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 DNMT3BQ9UBC3 853 aaKnown RBP23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 TUBGCP4Q9UGJ1 667 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 NUB1Q9Y5A7 615 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 STK25O00506 426 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 CXCL8P10145 99 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 RFX1P22670 979 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 MATR3P43243 847 aaKnown RBP eCLIP23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 GRIN1Q05586 938 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 DHX8Q14562 1220 aaKnown RBP23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 UVSSAQ2YD98 709 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 PABPC1LQ4VXU2 614 aaKnown RBP23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 ZPBP2Q6X784 338 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 GPBP1Q86WP2 473 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 ING5Q8WYH8 240 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 BICD1Q96G01 975 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 TBC1D32Q96NH3 1257 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 RTP3Q9BQQ7 232 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 REEP2Q9BRK0 252 aa23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 ZFP37Q9Y6Q3 630 aaPredicted RBP23.83■■□□□ 1.41
RPUSD3-206ENST00000433535 WDR27A2RRH5 827 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 POU2F2P09086 479 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 NCKAP1LP55160 1127 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 ARPP19P56211 112 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 SPAG1Q07617 926 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 MCL1Q07820 350 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 SLC8B1Q6J4K2 584 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 AK8Q96MA6 479 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 ARHGEF3Q9NR81 526 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 COL4A3Q01955 1670 aa23.82■■□□□ 1.4
RPUSD3-206ENST00000433535 SYN3O14994 580 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 CLDN3O15551 220 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 RPL9P32969 192 aaKnown RBP23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 MCM4P33991 863 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 UBA7P41226 1012 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 NPAS3Q8IXF0 933 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 DTWD2Q8NBA8 298 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 CALML4Q96GE6 196 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 SLC2A4RGQ9NR83 387 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 BLOC1S4Q9NUP1 217 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 LARSQ9P2J5 1176 aaKnown RBP23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 KCNG1Q9UIX4 513 aa23.81■■□□□ 1.4
RPUSD3-206ENST00000433535 NBL1P41271 181 aa23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 TNFSF9P41273 254 aa23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 KARSQ15046 597 aaKnown RBP23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 SLC5A9Q2M3M2 681 aa23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 HAUS6Q7Z4H7 955 aa23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 ZNF461Q8TAF7 563 aa23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 SUSD3Q96L08 255 aa23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 KXD1Q9BQD3 176 aa23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 FBXL5Q9UKA1 691 aa23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 ODF2LQ9ULJ1 636 aa23.8■■□□□ 1.4
RPUSD3-206ENST00000433535 PROB1E7EW31 1015 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 H0YCG3 227 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 K7ENM7 598 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 PRRG1O14668 218 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 TBC1D4O60343 1298 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 PLCG1P19174 1290 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 GPC5P78333 572 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 ANGPT1Q15389 498 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 CTXN3Q4LDR2 81 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 ZBTB41Q5SVQ8 909 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 MTSS1LQ765P7 747 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 BRAPQ7Z569 592 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 FRMD5Q7Z6J6 570 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 RASSF8Q8NHQ8 419 aa23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 ZFHX2Q9C0A1 2572 aaPredicted RBP23.79■■□□□ 1.4
RPUSD3-206ENST00000433535 HNRNPDLO14979 420 aaKnown RBP23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 SLC26A4O43511 780 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 ABLIM3O94929 683 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 FAM13AO94988 1023 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 LRG1P02750 347 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 RHOP08100 348 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 LIG4P49917 911 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 MCM6Q14566 821 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 SF3A1Q15459 793 aaKnown RBP23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 SPECC1Q5M775 1068 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 RTL10Q7L3V2 364 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 ASCL5Q7RTU5 278 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 MYCT1Q8N699 235 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 CYP4F11Q9HBI6 524 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 KCNH3Q9ULD8 1083 aa23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 MRPS23Q9Y3D9 190 aaKnown RBP23.78■■□□□ 1.4
RPUSD3-206ENST00000433535 TTC26A0AVF1 554 aa23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 ARHGEF37A1IGU5 675 aa23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 VPS37CA5D8V6 355 aaPredicted RBP23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 H7C4K7 107 aa23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 SEC24AO95486 1093 aa23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 BMP15O95972 392 aa23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 KRT18P05783 430 aaKnown RBP23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 CLTAP09496 248 aa23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 ELF1P32519 619 aa23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 MRPL58Q14197 206 aaKnown RBP23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 ZNF280DQ6N043 979 aa23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 RAD54LQ92698 747 aa23.77■■□□□ 1.4
RPUSD3-206ENST00000433535 DDX12PQ92771 950 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms