RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ARHGAP4P98171 946 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 CETN1Q12798 172 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 IKQ13123 557 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 DYNC1I2Q13409 638 aaKnown RBP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 ITPK1Q13572 414 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 P3H1Q32P28 736 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 TBC1D9BQ66K14 1250 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 KAZNQ674X7 775 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 APLFQ8IW19 511 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 PRR11Q96HE9 360 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 FAM161BQ96MY7 647 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 ATP8B3O60423 1300 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 CREB3O43889 395 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 PYGBP11216 843 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 FGFR1P11362 822 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 SCNN1BP51168 640 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 ZNF543Q08ER8 600 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 BFSP1Q12934 665 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 PPP2R5CQ13362 524 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 FASTKD3Q14CZ7 662 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 PDK4Q16654 411 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 ATL2Q8NHH9 583 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 MAML1Q92585 1016 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 TRAPPC9Q96Q05 1148 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 AGPAT3Q9NRZ7 376 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 ARMCX1Q9P291 453 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 USTQ9Y2C2 406 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 BCL9O00512 1426 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 LOC102724428A0A0B4J2F2 783 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 EEF2P13639 858 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 ADRA1DP25100 572 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 SERPINB3P29508 390 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 SIK1P57059 783 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 MAPK6Q16659 721 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 ZC3H12AQ5D1E8 599 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 PCNX4Q63HM2 1172 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 LLGL2Q6P1M3 1020 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 GRK7Q8WTQ7 553 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 CD101Q93033 1021 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 SYNCQ9H7C4 482 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 LGALS13Q9UHV8 139 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 ROBO3Q96MS0 1386 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 SIGLEC16A6NMB1 481 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 OPHN1O60890 802 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 ZSCAN5DPP0CG00 497 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 RALAP11233 206 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 NOP14P78316 857 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 SLC45A4Q5BKX6 768 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 RINLQ6ZS11 566 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 ANKMY2Q8IV38 441 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 KBTBD2Q8IY47 623 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 CFAP57Q96MR6 1250 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 EIF2AK1Q9BQI3 630 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 PARVGQ9HBI0 331 aa12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-202ENST00000433297 FRMPD4Q14CM0 1322 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 EML1O00423 815 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 FSCN2O14926 492 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 BMP3P12645 472 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 AMPD1P23109 780 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 HOXA13P31271 388 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 CCDC62Q6P9F0 684 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 IZUMO2Q6UXV1 221 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 LRRC6Q86X45 466 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 CFAP61Q8NHU2 1237 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 NSL1Q96IY1 281 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 ZNF184Q99676 751 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 DCLK3Q9C098 648 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 KLHL11Q9NVR0 708 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 FAM86B1E9PN63 330 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 FAM86B2P0C5J1 330 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 PGM1P36871 562 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 PTK6Q13882 451 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 QRICH1Q2TAL8 776 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 CNPY1Q3B7I2 92 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 TRIM74Q86UV6 250 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 TRIM73Q86UV7 250 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 ZBED8Q8IZ13 594 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 BICD1Q96G01 975 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 TUBGCP5Q96RT8 1024 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 NEU2Q9Y3R4 380 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 SNED1Q8TER0 1413 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 BANF1O75531 89 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 LYNP07948 512 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 ARFIP2P53365 341 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 OCRLQ01968 901 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 PPP3CAQ08209 521 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 NBPF5PQ86XG9 351 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 MAK16Q9BXY0 300 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 RTFDC1Q9BY42 306 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 VCX3BQ9H321 246 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 VCX3AQ9NNX9 186 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 ANKFY1Q9P2R3 1169 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 ADAMTSL3P82987 1691 aa12.24□□□□□ -0.45
HMGCS1-202ENST00000433297 GOLGA8IPA6NC78 632 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 GOLGA8JA6NMD2 632 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 ETS1P14921 441 aa12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 HADHBP55084 474 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-202ENST00000433297 CAV1Q03135 178 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms