RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 NBL1P41271 181 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 ARSHQ5FYA8 562 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 VARS2Q5ST30 1063 aaKnown RBP17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 LARP1BQ659C4 914 aaKnown RBP17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 SLC8B1Q6J4K2 584 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 PARM1Q6UWI2 310 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 ZPBP2Q6X784 338 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 DTWD2Q8NBA8 298 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 ZNF461Q8TAF7 563 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 ITFG1Q8TB96 612 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 FGF14Q92915 247 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 AK8Q96MA6 479 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 UPF2Q9HAU5 1272 aaKnown RBP17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 HCFC1R1Q9NWW0 138 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 DNMT3BQ9UBC3 853 aaKnown RBP17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 EP300Q09472 2414 aaPredicted RBP17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 MYO15AQ9UKN7 3530 aa17.68■□□□□ 0.42
AC055876.3-201ENST00000431496 CITO14578 2027 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 GVINP1Q7Z2Y8 2422 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 SYN3O14994 580 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 CLDN3O15551 220 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 ABLIM3O94929 683 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 MCL1Q07820 350 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 MRPL58Q14197 206 aaKnown RBP17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 NOLC1Q14978 699 aaKnown RBP eCLIP17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 SEZ6Q53EL9 994 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 TBC1D17Q9HA65 648 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 LARSQ9P2J5 1176 aaKnown RBP17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 ANKFY1Q9P2R3 1169 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 KCNH3Q9ULD8 1083 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 NUB1Q9Y5A7 615 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 NOTCH4Q99466 2003 aa17.67■□□□□ 0.42
AC055876.3-201ENST00000431496 H0YCG3 227 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 H7C4K7 107 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 UBA7P41226 1012 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 GPC5P78333 572 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 ROR1Q01973 937 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 PABPC1LQ4VXU2 614 aaKnown RBP17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 PHLDB3Q6NSJ2 640 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 MTSS1LQ765P7 747 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 HAUS6Q7Z4H7 955 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 KCNN1Q92952 543 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 PLEKHA5Q9HAU0 1116 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 ARHGEF3Q9NR81 526 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 CFAP54Q96N23 3096 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 MYH11P35749 1972 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 DMDP11532 3685 aa17.66■□□□□ 0.42
AC055876.3-201ENST00000431496 ARHGEF37A1IGU5 675 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 WDR27A2RRH5 827 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 CLTAP09496 248 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 ATF2P15336 505 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 RFX1P22670 979 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 ELF1P32519 619 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 NCKAP1LP55160 1127 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 ANGPT1Q15389 498 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 TCEAL8Q8IYN2 117 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 CALML4Q96GE6 196 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 SUSD3Q96L08 255 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 HAPLN2Q9GZV7 340 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 AVENQ9NQS1 362 aaPredicted RBP17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 FBXL5Q9UKA1 691 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 ODF2LQ9ULJ1 636 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 MRPS23Q9Y3D9 190 aaKnown RBP17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 VPS13AQ96RL7 3174 aa17.65■□□□□ 0.42
AC055876.3-201ENST00000431496 BMP15O95972 392 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 PTPN2P17706 415 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 MATR3P43243 847 aaKnown RBP eCLIP17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 ARPP19P56211 112 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 ASCL5Q7RTU5 278 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 FRMD5Q7Z6J6 570 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 GPBP1Q86WP2 473 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 NPAS3Q8IXF0 933 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 LRRC15Q8TF66 581 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 TBC1D32Q96NH3 1257 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 REEP2Q9BRK0 252 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 BLOC1S4Q9NUP1 217 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 TUBGCP4Q9UGJ1 667 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 SIT1Q9Y3P8 196 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 CACNA1IQ9P0X4 2223 aa17.64■□□□□ 0.41
AC055876.3-201ENST00000431496 TTC26A0AVF1 554 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 PRR23AA6NEV1 266 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 PRRG1O14668 218 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 SEC24AO95486 1093 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 LRG1P02750 347 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 RHOP08100 348 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 CXCL8P10145 99 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 SCP2P22307 547 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 MCM4P33991 863 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 LONP1P36776 959 aaKnown RBP17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 STARD6P59095 220 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 DHX8Q14562 1220 aaKnown RBP17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 ZBTB6Q15916 424 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 CTXN3Q4LDR2 81 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 TPGS2Q68CL5 300 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 BRAPQ7Z569 592 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 MYCT1Q8N699 235 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 APPL2Q8NEU8 664 aa17.63■□□□□ 0.41
AC055876.3-201ENST00000431496 DDX12PQ92771 950 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms